RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 VCAM1P19320 739 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 NOVP48745 357 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 ATP2B2Q01814 1243 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 SP3Q02447 781 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 DNM1Q05193 864 aaKnown RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 RRP12Q5JTH9 1297 aaKnown RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 C17orf99Q6UX52 265 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 CATSPERGQ6ZRH7 1159 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 IQCA1Q86XH1 822 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 TBC1D10CQ8IV04 446 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 SMCR8Q8TEV9 937 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 SYAP1Q96A49 352 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 CEP95Q96GE4 821 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 NBPF3Q9H094 633 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 ASCC2Q9H1I8 757 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 RPAP3Q9H6T3 665 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 NOL7Q9UMY1 257 aaKnown RBP4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 TAF6LQ9Y6J9 622 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 A0A1W2PRG0 241 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 PSMA5P28066 241 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 ST3GAL1Q11201 340 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 ZYXQ15942 572 aaKnown RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 PKN2Q16513 984 aaKnown RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 FAM110CQ1W6H9 321 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 HS1BP3Q53T59 392 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 LARP1BQ659C4 914 aaKnown RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 RCSD1Q6JBY9 416 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 LBX2Q6XYB7 198 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 RALYLQ86SE5 291 aaKnown RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 DGKHQ86XP1 1220 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 SIAH1Q8IUQ4 282 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 MB21D1Q8N884 522 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 NCOA7Q8NI08 942 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 DCAF4Q8WV16 495 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 BBXQ8WY36 941 aaPredicted RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 MTA3Q9BTC8 594 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 SH2B1Q9NRF2 756 aaPredicted RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 HOXC10Q9NYD6 342 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 MTMR6Q9Y217 621 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 ATP6V1DQ9Y5K8 247 aa4.84□□□□□ -1.64
GAPVD1-216ENST00000474637 NEDD4P46934 1319 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 VPS37CA5D8V6 355 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 E7EWF7 191 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CYP21A2P08686 494 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FDX1P10109 184 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 BCRP11274 1271 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TOP1P11387 765 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 HOXD10P28358 340 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 PRMT2P55345 433 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 UBE2HP62256 183 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 HERVK_113P62684 666 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 STK3Q13188 491 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 KRT32Q14532 448 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 COG2Q14746 738 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 SART3Q15020 963 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 BLOC1S2Q6QNY1 142 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM87AQ8NBN3 555 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF296Q8WUU4 475 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 GMCL1Q96IK5 515 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 ZSCAN10Q96SZ4 725 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 UBAC1Q9BSL1 405 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TANGO6Q9C0B7 1094 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 IL17RBQ9NRM6 502 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 MORF4L1Q9UBU8 362 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TSKSQ9UJT2 592 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FEM1BQ9UK73 627 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 RABGAP1Q9Y3P9 1069 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TACC3Q9Y6A5 838 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 ERICH2A1L162 156 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 F5H6K3 240 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 PLA2G6O60733 806 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 KDM4AO75164 1064 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CYP2C8P10632 490 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 COPB2P35606 906 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FCGRTP55899 365 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CCNA1P78396 465 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 LACTBP83111 547 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 KLRC3Q07444 240 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 TSGA10IPQ3SY00 556 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC183Q5T5S1 534 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 SLFN13Q68D06 897 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FAM173BQ6P4H8 233 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FERMT3Q86UX7 667 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 FAM160B2Q86V87 743 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 GPRC5AQ8NFJ5 357 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CHURC1Q8WUH1 139 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 MAP7D2Q96T17 732 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 P2RX7Q99572 595 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 KAT14Q9H8E8 782 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 INCENPQ9NQS7 918 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 CPA4Q9UI42 421 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 STX8Q9UNK0 236 aa4.83□□□□□ -1.64
GAPVD1-216ENST00000474637 WDR19Q8NEZ3 1342 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 B4E1Z4 1266 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms