RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 GPS2Q13227 327 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 GRIK5Q16478 980 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 NCAPH2Q6IBW4 605 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
SFXN5-211ENST00000474528 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 UBXN2AP68543 259 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 MORC3Q14149 939 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 FBXO2Q9UK22 296 aaPredicted RBP13.1□□□□□ -0.31
SFXN5-211ENST00000474528 MRC1P22897 1456 aa13.1□□□□□ -0.31
SFXN5-211ENST00000474528 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
SFXN5-211ENST00000474528 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
SFXN5-211ENST00000474528 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
SFXN5-211ENST00000474528 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 CHRNA5P30532 468 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 TROAPQ12815 778 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
SFXN5-211ENST00000474528 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
SFXN5-211ENST00000474528 PCDHA1Q9Y5I3 950 aa13.09□□□□□ -0.31
SFXN5-211ENST00000474528 KCNJ18B7U540 433 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.31
SFXN5-211ENST00000474528 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.31
SFXN5-211ENST00000474528 ICA1Q05084 483 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 PRKG1Q13976 671 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 KCNJ12Q14500 433 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 LRRC41Q15345 812 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 HERC4Q5GLZ8 1057 aaPredicted RBP13.08□□□□□ -0.31
SFXN5-211ENST00000474528 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.31
SFXN5-211ENST00000474528 SPATA1Q5VX52 437 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 SLFN13Q68D06 897 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 KIFC2Q96AC6 838 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.31
SFXN5-211ENST00000474528 AKR1B1P15121 316 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 CASP14P31944 242 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
SFXN5-211ENST00000474528 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 IKBKBO14920 756 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
SFXN5-211ENST00000474528 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 PRR16Q569H4 304 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 FAM114A1Q8IWE2 563 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 C21orf2O43822 256 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
SFXN5-211ENST00000474528 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■■■□ 22.7
SFXN5-211ENST00000474528 TDRD3Q9H7E2 651 aaKnown RBP13.08□□□□□ -0.32
SFXN5-211ENST00000474528 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
SFXN5-211ENST00000474528 PTPAQ15257 358 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 WDR78Q5VTH9 848 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 PPP1R13BQ96KQ4 1090 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 PSMB7Q99436 277 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 SALL1Q9NSC2 1324 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
SFXN5-211ENST00000474528 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 PLCG1P19174 1290 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 USP8P40818 1118 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 CCDC42Q96M95 316 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 TEX33O43247 280 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 MIGA2Q7L4E1 593 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
SFXN5-211ENST00000474528 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
SFXN5-211ENST00000474528 ORC4O43929 436 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
SFXN5-211ENST00000474528 TTLL1O95922 423 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 GYS1P13807 737 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 EVCP57679 992 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
SFXN5-211ENST00000474528 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 SEC23AQ15436 765 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 ERMNQ8TAM6 284 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 GJA10Q969M2 543 aa13.06□□□□□ -0.32
SFXN5-211ENST00000474528 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms