RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 RLFQ13129 1914 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 OLFML2BQ68BL8 750 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 FAM160B2Q86V87 743 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 CPXCR1Q8N123 301 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 PAWRQ96IZ0 340 aaKnown RBP21.97■■□□□ 1.11
CCDC171-206ENST00000474193 NBPF3Q9H094 633 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 INCENPQ9NQS7 918 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 CTNNA3Q9UI47 895 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 OGDHLQ9ULD0 1010 aa21.97■■□□□ 1.11
CCDC171-206ENST00000474193 TMEM232C9JQI7 657 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 FGRP09769 529 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 NT5C2P49902 561 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 STAT2P52630 851 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 HAND2P61296 217 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 AKNAD1Q5T1N1 836 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 SNRNP48Q6IEG0 339 aaKnown RBP21.96■■□□□ 1.11
CCDC171-206ENST00000474193 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 UBE2Q1Q7Z7E8 422 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 RUFY2Q8WXA3 655 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 DDX11Q96FC9 970 aa21.96■■□□□ 1.11
CCDC171-206ENST00000474193 ZNF214Q9UL59 606 aaPredicted RBP21.96■■□□□ 1.11
CCDC171-206ENST00000474193 EVI5O60447 810 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 MCCP23508 829 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 CCND3P30281 292 aaPredicted RBP21.95■■□□□ 1.1
CCDC171-206ENST00000474193 CYP2C19P33261 490 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 STAG1Q8WVM7 1258 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 GMCL1Q96IK5 515 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 FLRT1Q9NZU1 646 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 FBXO40Q9UH90 709 aa21.95■■□□□ 1.1
CCDC171-206ENST00000474193 ATP2A1O14983 1001 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 COBLO75128 1261 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 OAZ1P54368 228 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
CCDC171-206ENST00000474193 CCDC178Q5BJE1 867 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 RCSD1Q6JBY9 416 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 ESR2Q92731 530 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 IL17RBQ9NRM6 502 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 DIS3Q9Y2L1 958 aaKnown RBP21.94■■□□□ 1.1
CCDC171-206ENST00000474193 A0A0G2JMZ2 1700 aa21.94■■□□□ 1.1
CCDC171-206ENST00000474193 TOP1P11387 765 aaKnown RBP21.93■■□□□ 1.1
CCDC171-206ENST00000474193 REPS2Q8NFH8 660 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 TTC14Q96N46 770 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 DSCC1Q9BVC3 393 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 C11orf49Q9H6J7 331 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 SLC38A10Q9HBR0 1119 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 MTMR7Q9Y216 660 aa21.93■■□□□ 1.1
CCDC171-206ENST00000474193 COL11A1P12107 1806 aaPredicted RBP21.92■■□□□ 1.1
CCDC171-206ENST00000474193 PARP14Q460N5 1801 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 NMT2O60551 498 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 PLA2G6O60733 806 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 DCAF4Q8WV16 495 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 MAML3Q96JK9 1138 aa21.92■■□□□ 1.1
CCDC171-206ENST00000474193 RAVER2Q9HCJ3 691 aaKnown RBP21.92■■□□□ 1.1
CCDC171-206ENST00000474193 DDX20Q9UHI6 824 aaKnown RBP21.92■■□□□ 1.1
CCDC171-206ENST00000474193 H0YGN5 161 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 CHMLP26374 656 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 CCDC96Q2M329 555 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 IQCA1Q86XH1 822 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 ANKRD35Q8N283 1001 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 CHMP4CQ96CF2 233 aa21.91■■□□□ 1.1
CCDC171-206ENST00000474193 ZNFX1Q9P2E3 1918 aaKnown RBP21.9■■□□□ 1.1
CCDC171-206ENST00000474193 ZNF236Q9UL36 1845 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 CDC45O75419 566 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 PGK2P07205 417 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 LHX8Q68G74 356 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 KCTD1Q719H9 257 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 ARRDC4Q8NCT1 418 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 NRBP1Q9UHY1 535 aa21.9■■□□□ 1.1
CCDC171-206ENST00000474193 CYBAP13498 195 aa21.89■■□□□ 1.09
CCDC171-206ENST00000474193 DIS3LQ8TF46 1054 aaKnown RBP21.89■■□□□ 1.09
CCDC171-206ENST00000474193 TINF2Q9BSI4 451 aa21.89■■□□□ 1.09
CCDC171-206ENST00000474193 CNPY2Q9Y2B0 182 aa21.89■■□□□ 1.09
CCDC171-206ENST00000474193 RAD50Q92878 1312 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 SEPT4O43236 478 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 NOVP48745 357 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 ZNF792Q3KQV3 632 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 TKFCQ3LXA3 575 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 MSL3Q8N5Y2 521 aaKnown RBP21.88■■□□□ 1.09
CCDC171-206ENST00000474193 TMEM47Q9BQJ4 181 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 KRT23Q9C075 422 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 CNNM2Q9H8M5 875 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 RIPK3Q9Y572 518 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 TACC3Q9Y6A5 838 aa21.88■■□□□ 1.09
CCDC171-206ENST00000474193 BRCA2P51587 3418 aa21.87■■□□□ 1.09
CCDC171-206ENST00000474193 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
CCDC171-206ENST00000474193 PNMA2Q9UL42 364 aa21.87■■□□□ 1.09
CCDC171-206ENST00000474193 TRDNQ13061 729 aa21.86■■□□□ 1.09
CCDC171-206ENST00000474193 DGKHQ86XP1 1220 aa21.86■■□□□ 1.09
CCDC171-206ENST00000474193 TBC1D10CQ8IV04 446 aa21.86■■□□□ 1.09
CCDC171-206ENST00000474193 HOMER2Q9NSB8 354 aa21.86■■□□□ 1.09
CCDC171-206ENST00000474193 PRR12Q9ULL5 1215 aa21.86■■□□□ 1.09
CCDC171-206ENST00000474193 KBTBD13C9JR72 458 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 KDM4AO75164 1064 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 IGHA2P01877 340 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 ALAS1P13196 640 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 PRAMEF19Q5SWL8 479 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 CCDC174Q6PII3 467 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 KIAA1211Q6ZU35 1233 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms