RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 ZNF536O15090 1300 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 ERICH2A1L162 156 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 TMEM232C9JQI7 657 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 PFKFB2O60825 505 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 PPP1R11O60927 126 aaPredicted RBP12.11□□□□□ -0.47
CASC3-204ENST00000474190 BCRP11274 1271 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
CASC3-204ENST00000474190 SCRN1Q12765 414 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
CASC3-204ENST00000474190 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 BTBD7Q9P203 1132 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
CASC3-204ENST00000474190 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 GOLGA8BA8MQT2 603 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 VWA5AO00534 786 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 CTGFP29279 349 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 SNAP25P60880 206 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 HERVK_113P62684 666 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 SREBF2Q12772 1141 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 CRHR2Q13324 411 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 Q3C1V9 767 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 C17orf99Q6UX52 265 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 FEM1BQ9UK73 627 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
CASC3-204ENST00000474190 PRR12Q9ULL5 1215 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
CASC3-204ENST00000474190 ZBTB43O43298 467 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 CA12O43570 354 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 FLOT1O75955 427 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
CASC3-204ENST00000474190 COG2Q14746 738 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 ASPRV1Q53RT3 343 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
CASC3-204ENST00000474190 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 ADGRF4Q8IZF3 695 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 NUP133Q8WUM0 1156 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 RANBP17Q9H2T7 1088 aaKnown RBP12.09□□□□□ -0.47
CASC3-204ENST00000474190 SLC38A10Q9HBR0 1119 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 MYH8P13535 1937 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 CNTNAP5Q8WYK1 1306 aa12.09□□□□□ -0.47
CASC3-204ENST00000474190 GOLGA8AA7E2F4 631 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 ATP2A1O14983 1001 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 RAD21O60216 631 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 TLR2O60603 784 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 FDPSP14324 419 aaKnown RBP12.08□□□□□ -0.48
CASC3-204ENST00000474190 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 STAT2P52630 851 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
CASC3-204ENST00000474190 PKN1Q16512 942 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 CCDC96Q2M329 555 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 NOL8Q76FK4 1167 aaKnown RBP12.08□□□□□ -0.48
CASC3-204ENST00000474190 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
CASC3-204ENST00000474190 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
CASC3-204ENST00000474190 GTF3C6Q969F1 213 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 SNX21Q969T3 373 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 SPZ1Q9BXG8 430 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 RIPK3Q9Y572 518 aa12.08□□□□□ -0.48
CASC3-204ENST00000474190 OPLAHO14841 1288 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 CALM1P0DP23 149 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 CALM2P0DP24 149 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 CALM3P0DP25 149 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
CASC3-204ENST00000474190 STK3Q13188 491 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
CASC3-204ENST00000474190 RTN1Q16799 776 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 HOXC10Q9NYD6 342 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 CPA4Q9UI42 421 aa12.07□□□□□ -0.48
CASC3-204ENST00000474190 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 TRPA1O75762 1119 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 IFNAR1P17181 557 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 OSBPP22059 807 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 IRX3P78415 501 aaPredicted RBP12.06□□□□□ -0.48
CASC3-204ENST00000474190 CUL4AQ13619 759 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms