RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 HOXC6P09630 235 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 TSPY3P0CV98 308 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 TSPY8P0CW00 308 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 GRB14Q14449 540 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 SHHQ15465 462 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 GJC2Q5T442 439 aaPredicted RBP15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 SEMA6BQ9H3T3 888 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 IVNS1ABPQ9Y6Y0 642 aa15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
SHROOM3-204ENST00000473602 ORC4O43929 436 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 FLOT1O75955 427 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 TTLL1O95922 423 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 FGRP09769 529 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 DSG3P32926 999 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 C9orf50Q5SZB4 431 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 MKL1Q969V6 931 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 CEP95Q96GE4 821 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 MTMR4Q9NYA4 1195 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
SHROOM3-204ENST00000473602 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 F5H6K3 240 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 NT5C2P49902 561 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 TFAP4Q01664 338 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 CTDSPL2Q05D32 466 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 KLRC3Q07444 240 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 SLC39A5Q6ZMH5 540 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 DPP9Q86TI2 863 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 ARRDC4Q8NCT1 418 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
SHROOM3-204ENST00000473602 CDH23Q9H251 3354 aa15.33■□□□□ 0.05
SHROOM3-204ENST00000473602 IGHA2P01877 340 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 CYBAP13498 195 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 GMCL1P1Q8NEA9 526 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 SHCBP1Q8NEM2 672 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 MAFAQ8NHW3 353 aaPredicted RBP15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 BADQ92934 168 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 DSCC1Q9BVC3 393 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 ADAMTS5Q9UNA0 930 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 RAD50Q92878 1312 aa15.33■□□□□ 0.04
SHROOM3-204ENST00000473602 RAD21O60216 631 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 NDUFB10O96000 172 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 FAM47AQ5JRC9 791 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 PPP1R9AQ9ULJ8 1098 aa15.32■□□□□ 0.04
SHROOM3-204ENST00000473602 TTC28Q96AY4 2481 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 KBTBD13C9JR72 458 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 RANBP6O60518 1105 aaKnown RBP15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 ADORA2AP29274 412 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 TRIM60Q495X7 471 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 MYLIPQ8WY64 445 aa15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 TTYH1Q9H313 450 aaPredicted RBP15.31■□□□□ 0.04
SHROOM3-204ENST00000473602 TRIM43BA6NCK2 446 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 ZNF213O14771 459 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 STRNO43815 780 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 ADCYAP1R1P41586 468 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 NOVP48745 357 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 SNX17Q15036 470 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 PRAMEF19Q5SWL8 479 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 MFSD6Q6ZSS7 791 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 TRIM43Q96BQ3 446 aaPredicted RBP15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 SLF1Q9BQI6 1058 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 MROH8Q9H579 483 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 IL17RBQ9NRM6 502 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 TCP11L1Q9NUJ3 509 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
SHROOM3-204ENST00000473602 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 VWA5AO00534 786 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 SEPT4O43236 478 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 COBLO75128 1261 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 SLC25A27O95847 323 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 ERCC3P19447 782 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 COPB2P35606 906 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 HAND2P61296 217 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms