RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 CYP27C1Q4G0S4 372 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 DIEXFQ68CQ4 756 aaKnown RBP10.19□□□□□ -0.78
A1CF-209ENST00000473480 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
A1CF-209ENST00000473480 KCT2Q8NC54 265 aa10.19□□□□□ -0.78
A1CF-209ENST00000473480 NAIPQ13075 1403 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 USP19O94966 1318 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 CYP26A1O43174 497 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 EVA1CP58658 441 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
A1CF-209ENST00000473480 CDC37L1Q7L3B6 337 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 CYFIP1Q7L576 1253 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 NBPF11Q86T75 865 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 PMFBP1Q8TBY8 1022 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 TLR6Q9Y2C9 796 aa10.18□□□□□ -0.78
A1CF-209ENST00000473480 DAPK1P53355 1430 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 PRAMEF27A3QJZ7 478 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 FAM87AP0C7U9 286 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
A1CF-209ENST00000473480 FSTL1Q12841 308 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 PWP1Q13610 501 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 ZNF507Q8TCN5 953 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
A1CF-209ENST00000473480 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
A1CF-209ENST00000473480 TSNAXIP1Q2TAA8 658 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 XP32Q5T750 250 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 DTX1Q86Y01 620 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 RELL1Q8IUW5 271 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 C16orf71Q8IYS4 520 aaPredicted RBP10.16□□□□□ -0.78
A1CF-209ENST00000473480 PSMG3-AS1Q96PY0 264 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 RSRP1Q9BUV0 290 aa10.16□□□□□ -0.78
A1CF-209ENST00000473480 SPINK2P20155 84 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 PTF1AQ7RTS3 328 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
A1CF-209ENST00000473480 WNT10AQ9GZT5 417 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 LRRC4CQ9HCJ2 640 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 THRAP3Q9Y2W1 955 aaKnown RBP10.15□□□□□ -0.78
A1CF-209ENST00000473480 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 KIAA1210Q9ULL0 1709 aa10.15□□□□□ -0.78
A1CF-209ENST00000473480 CDK8P49336 464 aa10.14□□□□□ -0.79
A1CF-209ENST00000473480 RGS19P49795 217 aa10.14□□□□□ -0.79
A1CF-209ENST00000473480 LMNB2Q03252 620 aa10.14□□□□□ -0.79
A1CF-209ENST00000473480 JARID2Q92833 1246 aaPredicted RBP10.14□□□□□ -0.79
A1CF-209ENST00000473480 TMEM74Q96NL1 305 aa10.14□□□□□ -0.79
A1CF-209ENST00000473480 DUSP23Q9BVJ7 150 aa10.14□□□□□ -0.79
A1CF-209ENST00000473480 TULP4Q9NRJ4 1543 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 F6X3S4 739 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 GFRA2O00451 464 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 GBP2P32456 591 aaPredicted RBP10.13□□□□□ -0.79
A1CF-209ENST00000473480 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
A1CF-209ENST00000473480 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
A1CF-209ENST00000473480 CAMK2GQ13555 558 aaPredicted RBP10.13□□□□□ -0.79
A1CF-209ENST00000473480 MSMPQ1L6U9 139 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 PRDM10Q9NQV6 1147 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 PEAK1Q9H792 1746 aa10.13□□□□□ -0.79
A1CF-209ENST00000473480 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
A1CF-209ENST00000473480 CHRNA2Q15822 529 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 UBE3DQ7Z6J8 389 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 TOP6BLQ8N6T0 577 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 ABHD8Q96I13 439 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 RHOVQ96L33 236 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 E9PCH4 1651 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
A1CF-209ENST00000473480 NRXN1Q9ULB1 1477 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 FMN2Q9NZ56 1722 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 PARP4Q9UKK3 1724 aaKnown RBP10.11□□□□□ -0.79
A1CF-209ENST00000473480 ANKRD50Q9ULJ7 1429 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 LEFTY1O75610 366 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 PF4P02776 101 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 GRK4P32298 578 aa10.11□□□□□ -0.79
A1CF-209ENST00000473480 SSH2Q76I76 1423 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 LRIG2O94898 1065 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 BPNT1O95861 308 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 ARMCX6Q7L4S7 300 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 ERMP1Q7Z2K6 904 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 HID1Q8IV36 788 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 FBRSQ9HAH7 460 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 NMRK2Q9NPI5 230 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 KIAA0232Q92628 1395 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 ATP7BP35670 1465 aa10.1□□□□□ -0.79
A1CF-209ENST00000473480 CAP2P40123 477 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 DDB1Q16531 1140 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
A1CF-209ENST00000473480 HS2ST1Q7LGA3 356 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 GATAD2BQ8WXI9 593 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 KBTBD4Q9NVX7 518 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 BSDC1Q9NW68 430 aaPredicted RBP10.09□□□□□ -0.79
A1CF-209ENST00000473480 ZC3H7BQ9UGR2 993 aaKnown RBP10.09□□□□□ -0.79
A1CF-209ENST00000473480 ROCK1Q13464 1354 aa10.09□□□□□ -0.79
A1CF-209ENST00000473480 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
A1CF-209ENST00000473480 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 CILPO75339 1184 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 WNT11O96014 354 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 PDE4BQ07343 736 aa10.08□□□□□ -0.8
A1CF-209ENST00000473480 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
A1CF-209ENST00000473480 SNAP47Q5SQN1 464 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms