RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RICTORQ6R327 1708 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 PREX1Q8TCU6 1659 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 PABPN1LA6NDY0 278 aaKnown RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 ZBTB39O15060 712 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 AGR2O95994 175 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 ZSCAN20P17040 1043 aaPredicted RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 RAC1P63000 192 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 MLECQ14165 292 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 PPP2R5EQ16537 467 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 GJC2Q5T442 439 aaPredicted RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 LARP1BQ659C4 914 aaKnown RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 MZT2AQ6P582 158 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 LVRNQ6Q4G3 990 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 C16orf54Q6UWD8 224 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 BTLAQ7Z6A9 289 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 CEP120Q8N960 986 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 ZNF296Q8WUU4 475 aaPredicted RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 EDEM1Q92611 657 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 CDHR1Q96JP9 859 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 SERINC2Q96SA4 455 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 UBE2OQ9C0C9 1292 aaKnown RBP7.12□□□□□ -1.27
RTF1-203ENST00000473214 CXorf56Q9H5V9 222 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 KMT5AQ9NQR1 393 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 SLC5A4Q9NY91 659 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 ZFATQ9P243 1243 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 GTF2IRD1Q9UHL9 959 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 FAM50BQ9Y247 325 aa7.12□□□□□ -1.27
RTF1-203ENST00000473214 ANO9A1A5B4 782 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 APAF1O14727 1248 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 RFPL1O75677 317 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 PGRP06401 933 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 TYRP1P17643 537 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 GBP2P32456 591 aaPredicted RBP7.11□□□□□ -1.27
RTF1-203ENST00000473214 PWP1Q13610 501 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 C8orf34Q49A92 452 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 WDR45BQ5MNZ6 344 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 TOGARAM2Q6ZUX3 1019 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 SPATC1Q76KD6 591 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 RSRC2Q7L4I2 434 aaKnown RBP7.11□□□□□ -1.27
RTF1-203ENST00000473214 NECAB2Q7Z6G3 386 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 LMNTD2Q8IXW0 634 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 STAG2Q8N3U4 1231 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 FAM169BQ8N8A8 192 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 NUDT8Q8WV74 236 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
RTF1-203ENST00000473214 FMNL2Q96PY5 1086 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 RSRP1Q9BUV0 290 aa7.11□□□□□ -1.27
RTF1-203ENST00000473214 ATAD2Q6PL18 1390 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 A6NCN8 305 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 CPNE3O75131 537 aaKnown RBP7.1□□□□□ -1.27
RTF1-203ENST00000473214 TNFRSF21O75509 655 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 PDGFAP04085 211 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 MMP14P50281 582 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 TBC1D8BQ0IIM8 1120 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 PABPC4Q13310 644 aaKnown RBP eCLIP7.1□□□□□ -1.27
RTF1-203ENST00000473214 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
RTF1-203ENST00000473214 ALDH16A1Q8IZ83 802 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
RTF1-203ENST00000473214 OR8H2Q8N162 312 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 FRS2Q8WU20 508 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 NT5C1AQ9BXI3 368 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 RHOBTB2Q9BYZ6 727 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 GSX2Q9BZM3 304 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 NAGPAQ9UK23 515 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 ODF2LQ9ULJ1 636 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 MAPRE3Q9UPY8 281 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 ATP10BO94823 1461 aa7.1□□□□□ -1.27
RTF1-203ENST00000473214 WASHC2AQ641Q2 1341 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 FAM170AA1A519 330 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 GSG1L2A8MUP6 293 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 SLC5A1P13866 664 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 FLT3P36888 993 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 TDO2P48775 406 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 FXNQ16595 210 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 NBPF9Q3BBW0 867 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 TMEM67Q5HYA8 995 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 PSAPL1Q6NUJ1 521 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 GJA10Q969M2 543 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 EIF2AK1Q9BQI3 630 aaKnown RBP7.09□□□□□ -1.27
RTF1-203ENST00000473214 CENPOQ9BU64 300 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 NOC4LQ9BVI4 516 aaKnown RBP7.09□□□□□ -1.27
RTF1-203ENST00000473214 DNAJB12Q9NXW2 375 aaKnown RBP7.09□□□□□ -1.27
RTF1-203ENST00000473214 SAGE1Q9NXZ1 904 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 NEO1Q92859 1461 aa7.09□□□□□ -1.27
RTF1-203ENST00000473214 ARHGEF12Q9NZN5 1544 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 PHKG2P15735 406 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 OAS2P29728 719 aaKnown RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 EIF5P55010 431 aaKnown RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 CASP7P55210 303 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms