RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 SLFNL1Q499Z3 407 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 SNRNP48Q6IEG0 339 aaKnown RBP18.73■□□□□ 0.59
CCDC142-205ENST00000472962 CPXCR1Q8N123 301 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 IL27Q8NEV9 243 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 TOX2Q96NM4 488 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.591e-6■■□□□ 11.8
CCDC142-205ENST00000472962 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 SLC4A4Q9Y6R1 1079 aa18.73■□□□□ 0.59
CCDC142-205ENST00000472962 TNFRSF10AO00220 468 aa18.72■□□□□ 0.59
CCDC142-205ENST00000472962 ADAMTS4O75173 837 aa18.72■□□□□ 0.59
CCDC142-205ENST00000472962 PPIGQ13427 754 aaKnown RBP eCLIP18.72■□□□□ 0.597e-8■■■□□ 15.7
CCDC142-205ENST00000472962 ANKRD33Q7Z3H0 272 aa18.72■□□□□ 0.59
CCDC142-205ENST00000472962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC142-205ENST00000472962 SLF1Q9BQI6 1058 aa18.72■□□□□ 0.59
CCDC142-205ENST00000472962 ADAMTS5Q9UNA0 930 aa18.72■□□□□ 0.59
CCDC142-205ENST00000472962 SMIM22K7EJ46 135 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 ADD2P35612 726 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 MFSD5Q6N075 450 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 C16orf86Q6ZW13 317 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 TMEM199Q8N511 208 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 PCSK9Q8NBP7 692 aaKnown RBP18.71■□□□□ 0.59
CCDC142-205ENST00000472962 NUP88Q99567 741 aaPredicted RBP18.71■□□□□ 0.59
CCDC142-205ENST00000472962 TEX13BQ9BXU2 312 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 PPP1R12CQ9BZL4 782 aa18.71■□□□□ 0.59
CCDC142-205ENST00000472962 ZNF214Q9UL59 606 aaPredicted RBP18.71■□□□□ 0.59
CCDC142-205ENST00000472962 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
CCDC142-205ENST00000472962 SPTBN5Q9NRC6 3674 aaKnown RBP18.7■□□□□ 0.58
CCDC142-205ENST00000472962 ROBO3Q96MS0 1386 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 TLR3O15455 904 aaKnown RBP18.7■□□□□ 0.58
CCDC142-205ENST00000472962 HMMRO75330 724 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 COL9A1P20849 921 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 IGFBP4P22692 258 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 CCDC85BQ15834 202 aaPredicted RBP18.7■□□□□ 0.58
CCDC142-205ENST00000472962 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
CCDC142-205ENST00000472962 ANKRD35Q8N283 1001 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
CCDC142-205ENST00000472962 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 MKNK2Q9HBH9 465 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 SYNGAP1Q96PV0 1343 aa18.7■□□□□ 0.58
CCDC142-205ENST00000472962 GBF1Q92538 1859 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 GRXCR1A8MXD5 290 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 ZBED4O75132 1171 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 DUSP11O75319 330 aaKnown RBP18.69■□□□□ 0.58
CCDC142-205ENST00000472962 ASGR1P07306 291 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 ACRP10323 421 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 PBX2P40425 430 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 GNASQ5JWF2 1037 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
CCDC142-205ENST00000472962 TTC28Q96AY4 2481 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 MYADML2A6NDP7 307 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 SNAI1O95863 264 aaPredicted RBP18.68■□□□□ 0.58
CCDC142-205ENST00000472962 CSF2RAP15509 400 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
CCDC142-205ENST00000472962 KLHDC9Q8NEP7 349 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 KIFC2Q96AC6 838 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 PBX4Q9BYU1 374 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 ELP1O95163 1332 aa18.68■□□□□ 0.58
CCDC142-205ENST00000472962 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 MINDY4BA8MYZ0 360 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 HNRNPUQ00839 825 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 TMEM240Q5SV17 173 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 ZNF365Q70YC5 407 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 MTIF3Q9H2K0 278 aaKnown RBP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 ABHD16BQ9H3Z7 469 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 THEGQ9P2T0 379 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 ARPP21Q9UBL0 812 aaPredicted RBP18.67■□□□□ 0.58
CCDC142-205ENST00000472962 TBX21Q9UL17 535 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 RIPK3Q9Y572 518 aa18.67■□□□□ 0.58
CCDC142-205ENST00000472962 F5H6K3 240 aa18.66■□□□□ 0.58
CCDC142-205ENST00000472962 ARVCFO00192 962 aa18.66■□□□□ 0.58
CCDC142-205ENST00000472962 IRX5P78411 483 aaPredicted RBP18.66■□□□□ 0.58
CCDC142-205ENST00000472962 KLRC3Q07444 240 aa18.66■□□□□ 0.58
CCDC142-205ENST00000472962 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
CCDC142-205ENST00000472962 HOMER2Q9NSB8 354 aa18.66■□□□□ 0.58
CCDC142-205ENST00000472962 TCF20Q9UGU0 1960 aaKnown RBP18.65■□□□□ 0.58
CCDC142-205ENST00000472962 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 CHGBP05060 677 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 UBE3CQ15386 1083 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 RAB30Q15771 203 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 MAMDC4Q6UXC1 1216 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 ATXN2LQ8WWM7 1075 aaKnown RBP18.65■□□□□ 0.58
CCDC142-205ENST00000472962 SLC28A3Q9HAS3 691 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
CCDC142-205ENST00000472962 NDUFB10O96000 172 aa18.64■□□□□ 0.57
CCDC142-205ENST00000472962 ATP5JP18859 108 aa18.64■□□□□ 0.57
CCDC142-205ENST00000472962 CST5P28325 142 aaPredicted RBP18.64■□□□□ 0.57
CCDC142-205ENST00000472962 CYP2C18P33260 490 aa18.64■□□□□ 0.57
CCDC142-205ENST00000472962 ARMCX2Q7L311 632 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms