RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 BRF1Q92994 677 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 GOLPH3LQ9H4A5 285 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 NEURL1BA8MQ27 555 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
APTX-216ENST00000472896 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.57
APTX-216ENST00000472896 TOB2Q14106 344 aaPredicted RBP11.46□□□□□ -0.57
APTX-216ENST00000472896 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
APTX-216ENST00000472896 LRRC31Q6UY01 552 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 PDE11AQ9HCR9 933 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 PPP2R2CQ9Y2T4 447 aa11.46□□□□□ -0.57
APTX-216ENST00000472896 CSF1RP07333 972 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 CASP7P55210 303 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 GNG11P61952 73 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 FANCCQ00597 558 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.58
APTX-216ENST00000472896 SRGAP1Q7Z6B7 1085 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.58
APTX-216ENST00000472896 FSIP1Q8NA03 581 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 MRPS27Q92552 414 aaKnown RBP11.46□□□□□ -0.58
APTX-216ENST00000472896 SHISA4Q96DD7 197 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 TEPSINQ96N21 525 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 ZNF70Q9UC06 446 aaPredicted RBP11.46□□□□□ -0.58
APTX-216ENST00000472896 ZSWIM8A7E2V4 1837 aa11.46□□□□□ -0.58
APTX-216ENST00000472896 MYH3P11055 1940 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 CCL15-CCL14A0A0B4J2E2 113 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
APTX-216ENST00000472896 IL1R1P14778 569 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 MTFR1Q15390 333 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 CCL15Q16663 113 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 C15orf52Q6ZUT6 534 aaKnown RBP11.45□□□□□ -0.58
APTX-216ENST00000472896 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
APTX-216ENST00000472896 SMARCC2Q8TAQ2 1214 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 DPF3Q92784 378 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 L1RE1Q9UN81 338 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
APTX-216ENST00000472896 STX10O60499 249 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 RBM5P52756 815 aaKnown RBP eCLIP11.44□□□□□ -0.58
APTX-216ENST00000472896 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 VGLL4Q14135 290 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 NCAPHQ15003 741 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 ARHGEF6Q15052 776 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 ADALQ6DHV7 355 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
APTX-216ENST00000472896 A1CFQ9NQ94 594 aaKnown RBP11.44□□□□□ -0.58
APTX-216ENST00000472896 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 BRCA2P51587 3418 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 FANCGO15287 622 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 HMGB1P09429 215 aaKnown RBP11.44□□□□□ -0.58
APTX-216ENST00000472896 CTGFP29279 349 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 GTF2A2P52657 109 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 FKBP1AP62942 108 aaKnown RBP11.44□□□□□ -0.58
APTX-216ENST00000472896 SATB1Q01826 763 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 CLASRPQ8N2M8 674 aaKnown RBP11.44□□□□□ -0.58
APTX-216ENST00000472896 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
APTX-216ENST00000472896 CUTAO60888 179 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 ERLIN2O94905 339 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
APTX-216ENST00000472896 UBASH3AP57075 661 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
APTX-216ENST00000472896 SETQ01105 290 aaPredicted RBP11.43□□□□□ -0.58
APTX-216ENST00000472896 GCKRQ14397 625 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
APTX-216ENST00000472896 CNNM3Q8NE01 707 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.43□□□□□ -0.58
APTX-216ENST00000472896 TMEM39BQ9GZU3 492 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 EPC1Q9H2F5 836 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 AKAP2Q9Y2D5 859 aa11.43□□□□□ -0.58
APTX-216ENST00000472896 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 BTBD19C9JJ37 291 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 TLR2O60603 784 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
APTX-216ENST00000472896 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 MCM6Q14566 821 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 UBE2Q1Q7Z7E8 422 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 TMEM139Q8IV31 216 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 MICALL1Q8N3F8 863 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 RTEL1Q9NZ71 1219 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 SUFUQ9UMX1 484 aa11.42□□□□□ -0.58
APTX-216ENST00000472896 MCM3P25205 808 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 ME1P48163 572 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
APTX-216ENST00000472896 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms