RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 RAD21O60216 631 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 GNASQ5JWF2 1037 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 CCSAPQ6IQ19 270 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-203ENST00000472627 ZNF467Q7Z7K2 595 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-203ENST00000472627 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 SSH3Q8TE77 659 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 TEX13BQ9BXU2 312 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-203ENST00000472627 PPP1R9AQ9ULJ8 1098 aa16.83■□□□□ 0.28
SMURF1-203ENST00000472627 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
SMURF1-203ENST00000472627 CTDP1Q9Y5B0 961 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-203ENST00000472627 BMP1P13497 986 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 TMEM31Q5JXX7 168 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 SLC9C2Q5TAH2 1124 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 MAMDC4Q6UXC1 1216 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 RPUSD2Q8IZ73 545 aaKnown RBP16.82■□□□□ 0.28
SMURF1-203ENST00000472627 ABHD16BQ9H3Z7 469 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 HIPK3Q9H422 1215 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
SMURF1-203ENST00000472627 SLC4A7Q9Y6M7 1214 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 MYO9BQ13459 2157 aa16.82■□□□□ 0.28
SMURF1-203ENST00000472627 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
SMURF1-203ENST00000472627 ERC2O15083 957 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 CABYRO75952 493 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 TRIM27P14373 513 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 AKR1B1P15121 316 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 SNRNP48Q6IEG0 339 aaKnown RBP16.81■□□□□ 0.28
SMURF1-203ENST00000472627 ERC1Q8IUD2 1116 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
SMURF1-203ENST00000472627 NECAB3Q96P71 396 aaPredicted RBP16.81■□□□□ 0.28
SMURF1-203ENST00000472627 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
SMURF1-203ENST00000472627 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
SMURF1-203ENST00000472627 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
SMURF1-203ENST00000472627 CYP2C18P33260 490 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 GJA9P57773 515 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
SMURF1-203ENST00000472627 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
SMURF1-203ENST00000472627 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.8■□□□□ 0.28
SMURF1-203ENST00000472627 COG5Q9UP83 839 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
SMURF1-203ENST00000472627 PCDHA11Q9Y5I1 949 aa16.8■□□□□ 0.28
SMURF1-203ENST00000472627 MYADML2A6NDP7 307 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 ZEB2O60315 1214 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
SMURF1-203ENST00000472627 EEF2P13639 858 aaKnown RBP16.79■□□□□ 0.28
SMURF1-203ENST00000472627 PDE6AP16499 860 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 CLEC10AQ8IUN9 316 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 LRFN3Q9BTN0 628 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 FBXO40Q9UH90 709 aa16.79■□□□□ 0.28
SMURF1-203ENST00000472627 YBX2Q9Y2T7 364 aaKnown RBP16.79■□□□□ 0.28
SMURF1-203ENST00000472627 MYH8P13535 1937 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 BCAR3O75815 825 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 TFF2Q03403 129 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 FAM83BQ5T0W9 1011 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
SMURF1-203ENST00000472627 AACSQ86V21 672 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
SMURF1-203ENST00000472627 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.28
SMURF1-203ENST00000472627 PARP14Q460N5 1801 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 ZNF532Q9HCE3 1301 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
SMURF1-203ENST00000472627 ZBED4O75132 1171 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 CD4P01730 458 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 PFKMP08237 780 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 CYP2D6P10635 497 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 KCNQ1P51787 676 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
SMURF1-203ENST00000472627 DNAJC25-GNG10A0A024R161 153 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 ATP2A2P16615 1042 aaKnown RBP16.76■□□□□ 0.27
SMURF1-203ENST00000472627 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 CDK8P49336 464 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
SMURF1-203ENST00000472627 AP5M1Q9H0R1 490 aa16.76■□□□□ 0.27
SMURF1-203ENST00000472627 CHD9Q3L8U1 2897 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 ACTN1P12814 892 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 POU3F3P20264 500 aaPredicted RBP16.75■□□□□ 0.27
SMURF1-203ENST00000472627 RABGGTBP53611 331 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 CCL23P55773 120 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 EVX2Q03828 476 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
SMURF1-203ENST00000472627 ARMCX2Q7L311 632 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms