RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TMPRSS13Q9BYE2 586 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 CEP41Q9BYV8 373 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 KCNF1Q9H3M0 494 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 NMRK2Q9NPI5 230 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 ZNF652Q9Y2D9 606 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 ARFGEF1Q9Y6D6 1849 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 KCPQ6ZWJ8 1503 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 NPC1L1Q9UHC9 1359 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 TMEM238LA0A1B0GVL6 79 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 MEGF11A6BM72 1044 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 GLTPD2A6NH11 291 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 SART1O43290 800 aaKnown RBP4.66□□□□□ -1.66
XRN1-209ENST00000472625 DIAPH1O60610 1272 aaKnown RBP4.66□□□□□ -1.66
XRN1-209ENST00000472625 TIAF1O95411 115 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 BMP3P12645 472 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 IL13P35225 146 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 IL6STP40189 918 aaPredicted RBP4.66□□□□□ -1.66
XRN1-209ENST00000472625 PTPN12Q05209 780 aaKnown RBP4.66□□□□□ -1.66
XRN1-209ENST00000472625 PCDH1Q08174 1060 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 DDR1Q08345 913 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 C19orf57Q0VDD7 668 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 IKBKEQ14164 716 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
XRN1-209ENST00000472625 AEBP1Q8IUX7 1158 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 CNBD1Q8NA66 436 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 STK35Q8TDR2 534 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 MYRFLQ96LU7 910 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 CFAP53Q96M91 514 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 BRIP1Q9BX63 1249 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 EHD4Q9H223 541 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 TAOK3Q9H2K8 898 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 CLEC4MQ9H2X3 399 aaPredicted RBP4.66□□□□□ -1.66
XRN1-209ENST00000472625 LTBP3Q9NS15 1303 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 WDR90Q96KV7 1748 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
XRN1-209ENST00000472625 GNAT3A8MTJ3 354 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 SERPINB2P05120 415 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 NEFMP07197 916 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 HSPA5P11021 654 aaKnown RBP4.65□□□□□ -1.67
XRN1-209ENST00000472625 CYP19A1P11511 503 aaPredicted RBP4.65□□□□□ -1.67
XRN1-209ENST00000472625 KCNA3P22001 575 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 TM4SF1P30408 202 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 CD97P48960 835 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 PLCB3Q01970 1234 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 NFIAQ12857 509 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 NFIXQ14938 502 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 SGO2Q562F6 1265 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 FDX2Q6P4F2 183 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 INTS5Q6P9B9 1019 aaKnown RBP4.65□□□□□ -1.67
XRN1-209ENST00000472625 NXPE4Q6UWF7 544 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 FBXO33Q7Z6M2 555 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 PDZD3Q86UT5 571 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 C2CD5Q86YS7 1000 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 ZDHHC13Q8IUH4 622 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 DNAJC10Q8IXB1 793 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 FAM20CQ8IXL6 584 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 DNAJC5GQ8N7S2 189 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 FMNL2Q96PY5 1086 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 BCO2Q9BYV7 579 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 SRP68Q9UHB9 627 aaKnown RBP4.65□□□□□ -1.67
XRN1-209ENST00000472625 ZBTB1Q9Y2K1 713 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 TJP1Q07157 1748 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 HEG1Q9ULI3 1381 aa4.65□□□□□ -1.67
XRN1-209ENST00000472625 BRCA1P38398 1863 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 RNMTO43148 476 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 GAS2O43903 313 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 ADAMTS4O75173 837 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 NEFLP07196 543 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 PDIA4P13667 645 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 CHRNA5P30532 468 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 EIF5P55010 431 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 TAGLNQ01995 201 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 RASIP1Q5U651 963 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 STYK1Q6J9G0 422 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 ZNF790Q6PG37 636 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 CLEC4GQ6UXB4 293 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 BEND4Q6ZU67 534 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 SMIM5Q71RC9 77 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 PNMA8AQ86V59 439 aaPredicted RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 SHISA5Q8N114 240 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 SHKBP1Q8TBC3 707 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 RTF1Q92541 710 aaKnown RBP4.64□□□□□ -1.67
XRN1-209ENST00000472625 RNF208Q9H0X6 261 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 CACNA2D2Q9NY47 1150 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 NUDCQ9Y266 331 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 PCDHGC5Q9Y5F6 944 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 SCN7AQ01118 1682 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 ADAMTS7Q9UKP4 1686 aa4.64□□□□□ -1.67
XRN1-209ENST00000472625 NRXN2Q9P2S2 1712 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 N4BP2Q86UW6 1770 aaPredicted RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 SCN11AQ9UI33 1791 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 ANKRD33BA6NCL7 494 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 DRD2P14416 443 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 CANXP27824 592 aaKnown RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 PRELPP51888 382 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 GSTM4Q03013 218 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 MTHFSDQ2M296 383 aaKnown RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 UVSSAQ2YD98 709 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms