RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 FOXP4Q8IVH2 680 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-209ENST00000472147 CCDC116Q8IYX3 515 aa7.2□□□□□ -1.26
ITGB1-209ENST00000472147 HPS1Q92902 700 aa7.2□□□□□ -1.26
ITGB1-209ENST00000472147 P2RX7Q99572 595 aaKnown RBP7.2□□□□□ -1.26
ITGB1-209ENST00000472147 ASCC2Q9H1I8 757 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-209ENST00000472147 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.2□□□□□ -1.26
ITGB1-209ENST00000472147 AS3MTQ9HBK9 375 aa7.2□□□□□ -1.26
ITGB1-209ENST00000472147 GINM1Q9NU53 330 aa7.2□□□□□ -1.26
ITGB1-209ENST00000472147 GAKO14976 1311 aa7.2□□□□□ -1.26
ITGB1-209ENST00000472147 GLRX3O76003 335 aaKnown RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 AVPP01185 164 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 CYP2B6P20813 491 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 IL15P40933 162 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 RFX5P48382 616 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 BACE1P56817 501 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 GSTO1P78417 241 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 CCAR1Q8IX12 1150 aaKnown RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 KLHDC4Q8TBB5 520 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 SOCS4Q8WXH5 440 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 USP6NLQ92738 828 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 PPP1R12CQ9BZL4 782 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 DHX36Q9H2U1 1008 aaKnown RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 SEMA6BQ9H3T3 888 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 TFIP11Q9UBB9 837 aaKnown RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 PI4KBQ9UBF8 816 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 PRKAG2Q9UGJ0 569 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 HERC5Q9UII4 1024 aaKnown RBP7.19□□□□□ -1.26
ITGB1-209ENST00000472147 MYH3P11055 1940 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 ATRNL1Q5VV63 1379 aa7.19□□□□□ -1.26
ITGB1-209ENST00000472147 MSCO60682 206 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 RGS2P41220 211 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 RAB15P59190 212 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 DHX9Q08211 1270 aaKnown RBP7.18□□□□□ -1.26
ITGB1-209ENST00000472147 PDE3AQ14432 1141 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 ATP2B3Q16720 1220 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 DZIP1Q86YF9 867 aaKnown RBP7.18□□□□□ -1.26
ITGB1-209ENST00000472147 TRIB2Q92519 343 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 EDC3Q96F86 508 aaKnown RBP7.18□□□□□ -1.26
ITGB1-209ENST00000472147 GUCD1Q96NT3 240 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 CDX2Q99626 313 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-209ENST00000472147 TMPRSS4Q9NRS4 437 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 TMOD4Q9NZQ9 345 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 RBPJLQ9UBG7 517 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 ABCF2Q9UG63 623 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 AKAP2Q9Y2D5 859 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 BDP1A6H8Y1 2624 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 PTPRCP08575 1304 aa7.18□□□□□ -1.26
ITGB1-209ENST00000472147 PDS5AQ29RF7 1337 aaKnown RBP7.18□□□□□ -1.26
ITGB1-209ENST00000472147 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 PALM3A6NDB9 673 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 ATP9BO43861 1147 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 LILRA1O75019 489 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 IGSF3O75054 1194 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 ASNSP08243 561 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 SKIP12755 728 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 TIMP2P16035 220 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 ZKSCAN1P17029 563 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 HMGCS2P54868 508 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 RHBDL3P58872 404 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 TIMM10P62072 90 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 SMAD3P84022 425 aaKnown RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 LRRC26Q2I0M4 334 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 MAP7D1Q3KQU3 841 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 MFSD14CQ5VZR4 134 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 PLEKHH3Q7Z736 793 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 METTL16Q86W50 562 aaKnown RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 ARRDC4Q8NCT1 418 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 LPAR1Q92633 364 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 SENP6Q9GZR1 1112 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 DDX4Q9NQI0 724 aaKnown RBP7.17□□□□□ -1.26
ITGB1-209ENST00000472147 PFASO15067 1338 aa7.17□□□□□ -1.26
ITGB1-209ENST00000472147 TERTO14746 1132 aaKnown RBP7.16□□□□□ -1.26
ITGB1-209ENST00000472147 AXIN1O15169 862 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 STRNO43815 780 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 BAG3O95817 575 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 BTDP43251 543 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 PHKA1P46020 1223 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
ITGB1-209ENST00000472147 HERVK_113P62684 666 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 CCNA1P78396 465 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 MECOMQ03112 1051 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 PICALMQ13492 652 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 CCDC82Q8N4S0 544 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 COPRSQ9NQ92 184 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 RABGAP1Q9Y3P9 1069 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 PCDHB11Q9Y5F2 797 aa7.16□□□□□ -1.26
ITGB1-209ENST00000472147 TMEM265A0A087WTH1 108 aa7.15□□□□□ -1.26
ITGB1-209ENST00000472147 SLC15A5A6NIM6 579 aa7.15□□□□□ -1.26
ITGB1-209ENST00000472147 DNM1LO00429 736 aa7.15□□□□□ -1.26
ITGB1-209ENST00000472147 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-209ENST00000472147 HOXC6P09630 235 aa7.15□□□□□ -1.26
ITGB1-209ENST00000472147 CCND3P30281 292 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms