RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 CERS5Q8N5B7 392 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 TIFAQ96CG3 184 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 FAM89AQ96GI7 184 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 TMEM39BQ9GZU3 492 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 SCHIP1Q9P0W5 487 aaPredicted RBP5.66□□□□□ -1.5
LMNB1-205ENST00000472034 CSADQ9Y600 493 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 ECM29Q5VYK3 1845 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 NCOR2Q9Y618 2525 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 PLXNA1Q9UIW2 1896 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 HMGCRP04035 888 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 ITGB8P26012 769 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PHKA2P46019 1235 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 RTP1P59025 263 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PSMA6P60900 246 aaKnown RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PPIL2Q13356 520 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 SF3B3Q15393 1217 aaKnown RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 CFAP100Q494V2 611 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 C4orf17Q53FE4 359 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 GPAT2Q6NUI2 795 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 FOXR1Q6PIV2 292 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 SLC9A9Q8IVB4 645 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 TEX2Q8IWB9 1127 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PGBD3Q8N328 593 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 CCDC155Q8N6L0 562 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 TSEN2Q8NCE0 465 aaKnown RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 C1orf216Q8TAB5 229 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 GMCL1Q96IK5 515 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PHACTR3Q96KR7 559 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 SENP6Q9GZR1 1112 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 PRDM5Q9NQX1 630 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.65□□□□□ -1.54e-6■■■■■ 30.1
LMNB1-205ENST00000472034 ZNF232Q9UNY5 417 aa5.65□□□□□ -1.5
LMNB1-205ENST00000472034 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-205ENST00000472034 VPS13AQ96RL7 3174 aa5.65□□□□□ -1.51
LMNB1-205ENST00000472034 PRRC2BQ5JSZ5 2229 aaKnown RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 MED19A0JLT2 244 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 SERTM1A2A2V5 107 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 SLC35F4A4IF30 521 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 TRIM43BA6NCK2 446 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 TERTO14746 1132 aaKnown RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 IGSF3O75054 1194 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 F11P03951 625 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 CCND3P30281 292 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 PLA2G4AP47712 749 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 TTLL5Q6EMB2 1281 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 RIPOR1Q6ZS17 1223 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 MORC1Q86VD1 984 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 ERO1BQ86YB8 467 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 PRSS33Q8NF86 280 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 TRIB2Q92519 343 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 TRIM43Q96BQ3 446 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 WRNIP1Q96S55 665 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 FAM86C1Q9NVL1 165 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 BSDC1Q9NW68 430 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-205ENST00000472034 PRKAG2Q9UGJ0 569 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 JAG2Q9Y219 1238 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 ATP11BQ9Y2G3 1177 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 DAGLAQ9Y4D2 1042 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 MYO3BQ8WXR4 1341 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 AK9Q5TCS8 1911 aa5.64□□□□□ -1.51
LMNB1-205ENST00000472034 UNC79Q9P2D8 2635 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 TCP10L2B9ZVM9 353 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 ERC2O15083 957 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 PPFIA3O75145 1194 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 DKK1O94907 266 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 NOS2P35228 1153 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 TEAD4Q15561 434 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 EFHC2Q5JST6 749 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 SCG3Q8WXD2 468 aaKnown RBP5.63□□□□□ -1.51
LMNB1-205ENST00000472034 IRF7Q92985 503 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 CNTNAP3BQ96NU0 1288 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 PARK7Q99497 189 aaKnown RBP5.63□□□□□ -1.51
LMNB1-205ENST00000472034 POLR3GLQ9BT43 218 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 PBX4Q9BYU1 374 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 CNTNAP3Q9BZ76 1288 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 TSPAN10Q9H1Z9 355 aaPredicted RBP5.63□□□□□ -1.51
LMNB1-205ENST00000472034 NEUROD4Q9HD90 331 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 XDHP47989 1333 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 SETXQ7Z333 2677 aaKnown RBP5.63□□□□□ -1.51
LMNB1-205ENST00000472034 TRANK1O15050 2925 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
LMNB1-205ENST00000472034 RIF1Q5UIP0 2472 aaKnown RBP5.63□□□□□ -1.51
LMNB1-205ENST00000472034 ARAP2Q8WZ64 1704 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 PLXNB2O15031 1838 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 BRWD1Q9NSI6 2320 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 FASNP49327 2511 aaKnown RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 NCLP19338 710 aaKnown RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 ITGA6P23229 1130 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 ATP2B4P23634 1241 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 INPP5BP32019 993 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 EPHA4P54764 986 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 AIMP1Q12904 312 aaKnown RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 TRIM60Q495X7 471 aa5.62□□□□□ -1.51
LMNB1-205ENST00000472034 ARSJQ5FYB0 599 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-205ENST00000472034 KRT40Q6A162 431 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms