RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 FSTL1Q12841 308 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 SYDE2Q5VT97 1194 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 CCDC82Q8N4S0 544 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 PROCA1Q8NCQ7 364 aaPredicted RBP22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 CNKSR2Q8WXI2 1034 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 OPTNQ96CV9 577 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 RRP36Q96EU6 259 aaKnown RBP22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 UBA5Q9GZZ9 404 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 WDR33Q9C0J8 1336 aaKnown RBP22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 BAZ2BQ9UIF8 2168 aaKnown RBP22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 GJA5P36382 358 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 HMGCS2P54868 508 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 PKP1Q13835 747 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 SLC10A4Q96EP9 437 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 C8orf76Q96K31 380 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 MYPNQ86TC9 1320 aa22.47■■□□□ 1.19
CHMP2B-204ENST00000472024 PARP14Q460N5 1801 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 PNMA6FA0A0J9YX94 578 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 ZBTB5O15062 677 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 PPFIA3O75145 1194 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 MOGSQ13724 837 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 ZYXQ15942 572 aaKnown RBP22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 SHISA4Q96DD7 197 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 OTUD5Q96G74 571 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 WNK4Q96J92 1243 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 AIFM3Q96NN9 605 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 PIGSQ96S52 555 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 RANBP17Q9H2T7 1088 aaKnown RBP22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 TMOD4Q9NZQ9 345 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 PRR12Q9ULL5 1215 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 RLFQ13129 1914 aa22.46■■□□□ 1.19
CHMP2B-204ENST00000472024 ZSCAN22P10073 491 aaPredicted RBP22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 ZBTB48P10074 688 aaPredicted RBP22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 FDX1P10109 184 aa22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 HOXA7P31268 230 aaPredicted RBP22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 SLC16A2P36021 539 aa22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 PPP1R18Q6NYC8 613 aa22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 RPAP3Q9H6T3 665 aaPredicted RBP22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 BARHL2Q9NY43 387 aa22.45■■□□□ 1.18
CHMP2B-204ENST00000472024 ESYT2A0FGR8 921 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 RAD21O60216 631 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 KRT40Q6A162 431 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 CATSPERGQ6ZRH7 1159 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 TEX2Q8IWB9 1127 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 HHIPL1Q96JK4 782 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 SLF1Q9BQI6 1058 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 SEC63Q9UGP8 760 aaKnown RBP22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 PPP1R9AQ9ULJ8 1098 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 ADAMTS5Q9UNA0 930 aa22.44■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L15C9J2P7 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L13C9JLJ4 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L11C9JVI0 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L18D6R9N7 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L22D6RA61 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L17D6RBQ6 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L19D6RCP7 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L20D6RJB6 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 STXBP3O00186 592 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 XBP1P17861 261 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 USP17L24Q0WX57 530 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 SNAPC2Q13487 334 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 DGKZQ13574 1117 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 WWC2Q6AWC2 1192 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 SAPCD2Q86UD0 394 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 PRPF38AQ8NAV1 312 aaKnown RBP22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 PHF20Q9BVI0 1012 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 TLL2Q9Y6L7 1015 aa22.43■■□□□ 1.18
CHMP2B-204ENST00000472024 hCG_1642624A0A1W2PR95 340 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 PPP1R11O60927 126 aaPredicted RBP22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 MMP1P03956 469 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 NPY5RQ15761 445 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 CDC37Q16543 378 aaPredicted RBP22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 QRICH1Q2TAL8 776 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 SPRYD7Q5W111 196 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 GALNT17Q6IS24 598 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 CLEC17AQ6ZS10 378 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 FASTKD5Q7L8L6 764 aaKnown RBP22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 DAGLBQ8NCG7 672 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 MS4A4AQ96JQ5 239 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 FBXO28Q9NVF7 368 aa22.42■■□□□ 1.18
CHMP2B-204ENST00000472024 H3BQV1 296 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 F13A1P00488 732 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 HUNKP57058 714 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 TRAF1Q13077 416 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 TRIM29Q14134 588 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 TYW1BQ6NUM6 668 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 CCDC148Q8NFR7 591 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 CCDC12Q8WUD4 166 aaPredicted RBP22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 VAT1LQ9HCJ6 419 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 PNMA2Q9UL42 364 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 AGTPBP1Q9UPW5 1226 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 SLC45A1Q9Y2W3 748 aa22.41■■□□□ 1.18
CHMP2B-204ENST00000472024 A0A0G2JMZ2 1700 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 VPS37CA5D8V6 355 aaPredicted RBP22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 U2AF2P26368 475 aaKnown RBP eCLIP22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 DSG3P32926 999 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 GTF2A2P52657 109 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 RESTQ13127 1097 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms