RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 TAF6LQ9Y6J9 622 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 LCTP09848 1927 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
GGPS1-204ENST00000471812 DPYSL4O14531 572 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 FLOT1O75955 427 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 PRMT2P55345 433 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 TFAP4Q01664 338 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 IRF5Q13568 498 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-204ENST00000471812 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 ALX1Q15699 326 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 COA7Q96BR5 231 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 NYAP2Q9P242 653 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-204ENST00000471812 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 NEDD4P46934 1319 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 ZNF236Q9UL36 1845 aa11.23□□□□□ -0.61
GGPS1-204ENST00000471812 F5H6K3 240 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 WDR46O15213 610 aaKnown RBP11.22□□□□□ -0.61
GGPS1-204ENST00000471812 HOXD10P28358 340 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 SNAP25P60880 206 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 KLRC3Q07444 240 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 COG2Q14746 738 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 SPATC1LQ9H0A9 340 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 RNF208Q9H0X6 261 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
GGPS1-204ENST00000471812 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
GGPS1-204ENST00000471812 COBLO75128 1261 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 FGRP09769 529 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 ERCC3P19447 782 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
GGPS1-204ENST00000471812 PTH1RQ03431 593 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 PLS1Q14651 629 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 LRRFIP1Q32MZ4 808 aaKnown RBP11.21□□□□□ -0.61
GGPS1-204ENST00000471812 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.61
GGPS1-204ENST00000471812 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
GGPS1-204ENST00000471812 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
GGPS1-204ENST00000471812 DEFB118Q96PH6 123 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 PPP1R9AQ9ULJ8 1098 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 MTMR7Q9Y216 660 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
GGPS1-204ENST00000471812 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 TSPY3P0CV98 308 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 TSPY8P0CW00 308 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 PTPREP23469 700 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 MAPK4P31152 587 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 GRB14Q14449 540 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 MAP3K21Q5TCX8 1036 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 UBE2Q1Q7Z7E8 422 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 U2AF1L4Q8WU68 220 aaKnown RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 LPAR1Q92633 364 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 MKL1Q969V6 931 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
GGPS1-204ENST00000471812 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 DDX49Q9Y6V7 483 aaKnown RBP11.2□□□□□ -0.62
GGPS1-204ENST00000471812 VWA5AO00534 786 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 ORC4O43929 436 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 IGHA2P01877 340 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 HMGCRP04035 888 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 PGK2P07205 417 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 GJB1P08034 283 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 CHMLP26374 656 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 ADORA2AP29274 412 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 CYP2C19P33261 490 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 PDE4BQ07343 736 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 TTBK2Q6IQ55 1244 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 KCTD1Q719H9 257 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
GGPS1-204ENST00000471812 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
GGPS1-204ENST00000471812 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
GGPS1-204ENST00000471812 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
GGPS1-204ENST00000471812 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
GGPS1-204ENST00000471812 TSPY2A6NKD2 308 aa11.18□□□□□ -0.62
GGPS1-204ENST00000471812 TTLL1O95922 423 aa11.18□□□□□ -0.62
GGPS1-204ENST00000471812 MCCP23508 829 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms