RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
SSR4-207ENST00000471724 GPR25O00155 361 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 ST18O60284 1047 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 FDX1P10109 184 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 CYP2C8P10632 490 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 EVCP57679 992 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 CRHR2Q13324 411 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
SSR4-207ENST00000471724 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
SSR4-207ENST00000471724 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
SSR4-207ENST00000471724 ADGRA2Q96PE1 1338 aa16.37■□□□□ 0.21
SSR4-207ENST00000471724 GOLGA8AA7E2F4 631 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 TLR2O60603 784 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 FKTNO75072 461 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 DSG3P32926 999 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 GNAQP50148 359 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 AK2P54819 239 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
SSR4-207ENST00000471724 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
SSR4-207ENST00000471724 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.218e-6■■□□□ 13.7
SSR4-207ENST00000471724 RTN1Q16799 776 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 ZNF296Q8WUU4 475 aaPredicted RBP16.35■□□□□ 0.21
SSR4-207ENST00000471724 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 ZNF274Q96GC6 653 aaPredicted RBP16.35■□□□□ 0.21
SSR4-207ENST00000471724 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
SSR4-207ENST00000471724 PLXNB2O15031 1838 aa16.35■□□□□ 0.21
SSR4-207ENST00000471724 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 RXRAP19793 462 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 PKN2Q16513 984 aaKnown RBP16.34■□□□□ 0.21
SSR4-207ENST00000471724 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
SSR4-207ENST00000471724 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
SSR4-207ENST00000471724 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 ATG4CQ96DT6 458 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
SSR4-207ENST00000471724 MORF4L1Q9UBU8 362 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 RABGAP1Q9Y3P9 1069 aa16.34■□□□□ 0.21
SSR4-207ENST00000471724 VWA5AO00534 786 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 DHX16O60231 1041 aaKnown RBP16.33■□□□□ 0.2
SSR4-207ENST00000471724 ZBED4O75132 1171 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 PAGR1Q9BTK6 254 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 PNMA2Q9UL42 364 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 ADAMTS5Q9UNA0 930 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
SSR4-207ENST00000471724 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
SSR4-207ENST00000471724 BCRP11274 1271 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
SSR4-207ENST00000471724 COPB2P35606 906 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 SLC16A2P36021 539 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 MCM2P49736 904 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 OAZ1P54368 228 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 CCNA1P78396 465 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 TMTC3Q6ZXV5 915 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 RAB11FIP4Q86YS3 637 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 ANKRD13CQ8N6S4 541 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
SSR4-207ENST00000471724 SLC38A10Q9HBR0 1119 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
SSR4-207ENST00000471724 ERVK-9P63128 1117 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 ERVK-24P63145 666 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 ARHGEF6Q15052 776 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 CPLX2Q6PUV4 134 aaKnown RBP16.31■□□□□ 0.2
SSR4-207ENST00000471724 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
SSR4-207ENST00000471724 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 ABHD8Q96I13 439 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
SSR4-207ENST00000471724 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
SSR4-207ENST00000471724 CNTNAP5Q8WYK1 1306 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 PLEKHA8P1O95397 391 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 SP3Q02447 781 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 TRAF1Q13077 416 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms