RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 ADCY6O43306 1168 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 GNAT2P19087 354 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 SNAP25P60880 206 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 HDAC1Q13547 482 aaPredicted RBP11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 LRRC41Q15345 812 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF444Q8N0Y2 327 aaPredicted RBP11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 CPXCR1Q8N123 301 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 FERMT2Q96AC1 680 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 TINF2Q9BSI4 451 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 PLIN4Q96Q06 1357 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF536O15090 1300 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 DNM1LO00429 736 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 ERC2O15083 957 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 PGK1P00558 417 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 PTGS1P23219 599 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 ITGB8P26012 769 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 ADCYAP1R1P41586 468 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 RTP1P59025 263 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 SLFN13Q68D06 897 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 Q7L0L9 218 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
RPRD1B-204ENST00000471511 A0A1W2PPC1 479 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 MCCP23508 829 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 NOVP48745 357 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 NMIQ13287 307 aaPredicted RBP11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 GMCL1P1Q8NEA9 526 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 NAPBQ9H115 298 aa11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 DIS3Q9Y2L1 958 aaKnown RBP11.64□□□□□ -0.55
RPRD1B-204ENST00000471511 ASTN1O14525 1302 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TMEM232C9JQI7 657 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 MSCO60682 206 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 ADAMTS4O75173 837 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TTLL1O95922 423 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 FGAP02671 866 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 FGRP09769 529 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TSPY3P0CV98 308 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TSPY8P0CW00 308 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 BMP3P12645 472 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 CNTN2Q02246 1040 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 KCTD2Q14681 263 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 SNX17Q15036 470 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TRIM43Q96BQ3 446 aaPredicted RBP11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 PURBQ96QR8 312 aaKnown RBP11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 TEX13BQ9BXU2 312 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 UBE2OQ9C0C9 1292 aaKnown RBP11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 KATNBL1Q9H079 304 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 ATP11BQ9Y2G3 1177 aa11.63□□□□□ -0.55
RPRD1B-204ENST00000471511 SOWAHBA6NEL2 793 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 ZBED4O75132 1171 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 ALX1Q15699 326 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 LRIT3Q3SXY7 679 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 CCSAPQ6IQ19 270 aaPredicted RBP11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 PLEKHM2Q8IWE5 1019 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 TDHQ8IZJ6 230 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 ARRDC4Q8NCT1 418 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 EVI5LQ96CN4 794 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 NACAP1Q9BZK3 213 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 FEM1BQ9UK73 627 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
RPRD1B-204ENST00000471511 MYH4Q9Y623 1939 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 CTAGE5O15320 804 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 HSPD1P10809 573 aaKnown RBP11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 EPHB4P54760 987 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 HAND2P61296 217 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 TLE2Q04725 743 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 PDE4BQ07343 736 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 MUM1L1Q5H9M0 696 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 KLHDC9Q8NEP7 349 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 IL25Q9H293 177 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 XPNPEP3Q9NQH7 507 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 PDLIM7Q9NR12 457 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 HOMER2Q9NSB8 354 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms