RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 RILPL1Q5EBL4 403 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 SULF1Q8IWU6 871 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 ZBTB5O15062 677 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 STK38Q15208 465 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 CCDC84Q86UT8 332 aaPredicted RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 SPICE1Q8N0Z3 855 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 TNFRSF25Q93038 417 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 POLR2AP24928 1970 aaKnown RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 IQCA1LA6NCM1 817 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 IKQ13123 557 aaPredicted RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 CAVIN1Q6NZI2 390 aaKnown RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 SCYL3Q8IZE3 742 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 GNA11P29992 359 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 TOB1P50616 345 aaPredicted RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
LINC00880-201ENST00000471357 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 FEZ1Q99689 392 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
LINC00880-201ENST00000471357 ATAD5Q96QE3 1844 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 SPTLC2O15270 562 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 SLC39A14Q15043 492 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
LINC00880-201ENST00000471357 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
LINC00880-201ENST00000471357 COA7Q96BR5 231 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
LINC00880-201ENST00000471357 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
LINC00880-201ENST00000471357 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
LINC00880-201ENST00000471357 ESYT2A0FGR8 921 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 M0R2N6 131 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 ME1P48163 572 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 STAT2P52630 851 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 CDC37Q16543 378 aaPredicted RBP13.71□□□□□ -0.21
LINC00880-201ENST00000471357 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 PCDHA6Q9UN73 950 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 PCDHA8Q9Y5H6 950 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
LINC00880-201ENST00000471357 POTECB2RU33 542 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 ADAMTS3O15072 1205 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.22
LINC00880-201ENST00000471357 USP2O75604 605 aaPredicted RBP13.71□□□□□ -0.22
LINC00880-201ENST00000471357 PTPAQ15257 358 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 PIK3AP1Q6ZUJ8 805 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 CHURC1Q8WUH1 139 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 WDR18Q9BV38 432 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 PCDHA7Q9UN72 937 aa13.71□□□□□ -0.22
LINC00880-201ENST00000471357 PLA2G6O60733 806 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PPP6R2O75170 966 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PTPRAP18433 802 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 ATP2B1P20020 1258 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PRKG1Q13976 671 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 EAPPQ56P03 285 aaPredicted RBP13.7□□□□□ -0.22
LINC00880-201ENST00000471357 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
LINC00880-201ENST00000471357 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
LINC00880-201ENST00000471357 JMYQ8N9B5 988 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00880-201ENST00000471357 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 SYAP1Q96A49 352 aaPredicted RBP13.7□□□□□ -0.22
LINC00880-201ENST00000471357 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PRR12Q9ULL5 1215 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
LINC00880-201ENST00000471357 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
LINC00880-201ENST00000471357 TRAPPC10P48553 1259 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 USP14P54578 494 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 GSE1Q14687 1217 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 NOL9Q5SY16 702 aaKnown RBP13.69□□□□□ -0.22
LINC00880-201ENST00000471357 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms