RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 IL17RBQ9NRM6 502 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
COL1A1-203ENST00000471344 SLC3A2P08195 630 aaKnown RBP18.24■□□□□ 0.51
COL1A1-203ENST00000471344 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
COL1A1-203ENST00000471344 AAMPQ13685 434 aa18.24■□□□□ 0.51
COL1A1-203ENST00000471344 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
COL1A1-203ENST00000471344 SNRNP48Q6IEG0 339 aaKnown RBP18.24■□□□□ 0.51
COL1A1-203ENST00000471344 CPXCR1Q8N123 301 aa18.24■□□□□ 0.51
COL1A1-203ENST00000471344 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
COL1A1-203ENST00000471344 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-203ENST00000471344 ZNF792Q3KQV3 632 aa18.23■□□□□ 0.51
COL1A1-203ENST00000471344 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
COL1A1-203ENST00000471344 PRPF38AQ8NAV1 312 aaKnown RBP18.23■□□□□ 0.51
COL1A1-203ENST00000471344 TEX13BQ9BXU2 312 aa18.23■□□□□ 0.51
COL1A1-203ENST00000471344 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
COL1A1-203ENST00000471344 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
COL1A1-203ENST00000471344 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 FGAP02671 866 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 HSPD1P10809 573 aaKnown RBP18.22■□□□□ 0.51
COL1A1-203ENST00000471344 BMP3P12645 472 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
COL1A1-203ENST00000471344 KCTD2Q14681 263 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 GJC2Q5T442 439 aaPredicted RBP18.22■□□□□ 0.51
COL1A1-203ENST00000471344 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
COL1A1-203ENST00000471344 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
COL1A1-203ENST00000471344 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 RANBP6O60518 1105 aaKnown RBP18.21■□□□□ 0.51
COL1A1-203ENST00000471344 HAND2P61296 217 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 ALX1Q15699 326 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-203ENST00000471344 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-203ENST00000471344 SLC5A4Q9NY91 659 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 MTMR7Q9Y216 660 aa18.21■□□□□ 0.51
COL1A1-203ENST00000471344 SEPT4O43236 478 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 MSCO60682 206 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 ZBED4O75132 1171 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 SDSP20132 328 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 MCCP23508 829 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-203ENST00000471344 SNAP25P60880 206 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
COL1A1-203ENST00000471344 KCTD1Q719H9 257 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 LAMA2P24043 3122 aaKnown RBP18.2■□□□□ 0.5
COL1A1-203ENST00000471344 SMCHD1A6NHR9 2005 aa18.2■□□□□ 0.5
COL1A1-203ENST00000471344 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 DNM1LO00429 736 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 ORC4O43929 436 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-203ENST00000471344 FGRP09769 529 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 TINF2Q9BSI4 451 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 OSBPL3Q9H4L5 887 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
COL1A1-203ENST00000471344 DNAJC25-GNG10A0A024R161 153 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 PDE4AP27815 886 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 COPB2P35606 906 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 SLC1A4P43007 532 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-203ENST00000471344 STAT2P52630 851 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 FGD4Q96M96 766 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 GDF15Q99988 308 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-203ENST00000471344 ZNF536O15090 1300 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
COL1A1-203ENST00000471344 MCM3APO60318 1980 aa18.17■□□□□ 0.5
COL1A1-203ENST00000471344 SOX1O00570 391 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-203ENST00000471344 ZNF865P0CJ78 1059 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-203ENST00000471344 NOVP48745 357 aa18.17■□□□□ 0.5
COL1A1-203ENST00000471344 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-203ENST00000471344 CWC27Q6UX04 472 aaKnown RBP18.17■□□□□ 0.5
COL1A1-203ENST00000471344 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
COL1A1-203ENST00000471344 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
COL1A1-203ENST00000471344 NEDD4P46934 1319 aa18.17■□□□□ 0.5
COL1A1-203ENST00000471344 LRRC41Q15345 812 aa18.16■□□□□ 0.5
COL1A1-203ENST00000471344 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
COL1A1-203ENST00000471344 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
COL1A1-203ENST00000471344 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
COL1A1-203ENST00000471344 IL25Q9H293 177 aa18.16■□□□□ 0.5
COL1A1-203ENST00000471344 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-203ENST00000471344 PGK1P00558 417 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 TICAM2Q86XR7 235 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 TMEM47Q9BQJ4 181 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
COL1A1-203ENST00000471344 LCTP09848 1927 aa18.15■□□□□ 0.5
COL1A1-203ENST00000471344 LTBP2Q14767 1821 aa18.14■□□□□ 0.5
COL1A1-203ENST00000471344 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
COL1A1-203ENST00000471344 ADCY6O43306 1168 aa18.14■□□□□ 0.49
COL1A1-203ENST00000471344 GSPT1P15170 499 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms