RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
CCDC39-202ENST00000471307 EBF1Q9UH73 591 aa9.24□□□□□ -0.93
CCDC39-202ENST00000471307 STRIP2Q9ULQ0 834 aa9.24□□□□□ -0.93
CCDC39-202ENST00000471307 FAM86C2PA6NEL3 165 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 ZNF205O95201 554 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 TRHRP34981 398 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-202ENST00000471307 ZYXQ15942 572 aaKnown RBP9.23□□□□□ -0.93
CCDC39-202ENST00000471307 RUFY4Q6ZNE9 571 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 PPFIBP1Q86W92 1011 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 DSCC1Q9BVC3 393 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
CCDC39-202ENST00000471307 CCSER2Q9H7U1 834 aa9.23□□□□□ -0.93
CCDC39-202ENST00000471307 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
CCDC39-202ENST00000471307 CTSKP43235 329 aa9.22□□□□□ -0.93
CCDC39-202ENST00000471307 TIGD5Q53EQ6 642 aa9.22□□□□□ -0.93
CCDC39-202ENST00000471307 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
CCDC39-202ENST00000471307 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
CCDC39-202ENST00000471307 TNFRSF10DQ9UBN6 386 aa9.22□□□□□ -0.93
CCDC39-202ENST00000471307 INPP5FQ9Y2H2 1132 aa9.22□□□□□ -0.93
CCDC39-202ENST00000471307 NRDCO43847 1150 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 TSPAN15O95858 294 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-202ENST00000471307 AXDND1Q5T1B0 1012 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-202ENST00000471307 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.94
CCDC39-202ENST00000471307 DIRC2Q96SL1 478 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 GP6Q9HCN6 339 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 GPR160Q9UJ42 338 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 MINPP1Q9UNW1 487 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 FHOD1Q9Y613 1164 aa9.21□□□□□ -0.94
CCDC39-202ENST00000471307 A0A087WZG4 1122 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 FKTNO75072 461 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 VAV1P15498 845 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 CD247P20963 164 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 NOL9Q5SY16 702 aaKnown RBP9.2□□□□□ -0.94
CCDC39-202ENST00000471307 DCAF15Q66K64 600 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 CWF19L1Q69YN2 538 aaKnown RBP9.2□□□□□ -0.94
CCDC39-202ENST00000471307 SHISA4Q96DD7 197 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
CCDC39-202ENST00000471307 HHIPL1Q96JK4 782 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
CCDC39-202ENST00000471307 MEIS1O00470 390 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 PSPNO60542 156 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 USP2O75604 605 aaPredicted RBP9.19□□□□□ -0.94
CCDC39-202ENST00000471307 ITGA4P13612 1032 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 CASP7P55210 303 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 CRTC3Q6UUV7 619 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 CEP128Q6ZU80 1094 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 SYDE1Q6ZW31 735 aaPredicted RBP9.19□□□□□ -0.94
CCDC39-202ENST00000471307 NLRX1Q86UT6 975 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 SHDQ96IW2 340 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 SLC26A8Q96RN1 970 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 CRTAC1Q9NQ79 661 aa9.19□□□□□ -0.94
CCDC39-202ENST00000471307 NOTOA8MTQ0 251 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 ZNF445P59923 1031 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 JAG1P78504 1218 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 TCEAL1Q15170 157 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 CPLX3Q8WVH0 158 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 LTBP3Q9NS15 1303 aa9.18□□□□□ -0.94
CCDC39-202ENST00000471307 SF3B6Q9Y3B4 125 aaKnown RBP9.18□□□□□ -0.94
CCDC39-202ENST00000471307 A0A1W2PQH9 124 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 FADS2P1A8MWK0 482 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
CCDC39-202ENST00000471307 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 RTP1P59025 263 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 ZNF124Q15973 351 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 CDADC1Q9BWV3 514 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 ERVK13-1Q9NX77 482 aa9.17□□□□□ -0.94
CCDC39-202ENST00000471307 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-202ENST00000471307 BTBD11A6QL63 1104 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 CBFA2T2O43439 604 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 PEX10O60683 326 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 TCF3P15923 654 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 NOP2P46087 812 aaKnown RBP9.16□□□□□ -0.94
CCDC39-202ENST00000471307 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 GALNT18Q6P9A2 607 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 ZPBP2Q6X784 338 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 WHRNQ9P202 907 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 DIS3Q9Y2L1 958 aaKnown RBP9.16□□□□□ -0.94
CCDC39-202ENST00000471307 ZNF451Q9Y4E5 1061 aa9.16□□□□□ -0.94
CCDC39-202ENST00000471307 A0A1W2PQ45 241 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-202ENST00000471307 A0A1W2PQY0 241 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 NFIBO00712 420 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-202ENST00000471307 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-202ENST00000471307 FZD5Q13467 585 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 GNPTABQ3T906 1256 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 FIBCD1Q8N539 461 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 HAUS7Q99871 368 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 ZNF552Q9H707 407 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-202ENST00000471307 AP5S1Q9NUS5 200 aa9.15□□□□□ -0.94
CCDC39-202ENST00000471307 H0Y8X5 98 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 HRKO00198 91 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 PNLIPP16233 465 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 GLDCP23378 1020 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 POU4F1Q01851 419 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 RTP2Q5QGT7 225 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms