RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-218ENST00000470942 CPXCR1Q8N123 301 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 ESR2Q92731 530 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 GMCL1Q96IK5 515 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 MMP19Q99542 508 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 IL25Q9H293 177 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 FLRT1Q9NZU1 646 aa18.52■□□□□ 0.56
HDAC6-218ENST00000470942 ZNF214Q9UL59 606 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-218ENST00000470942 RAD50Q92878 1312 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 COPB2P35606 906 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 MAP3K21Q5TCX8 1036 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 RCSD1Q6JBY9 416 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 ABRAQ8N0Z2 381 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 CHURC1Q8WUH1 139 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 TEX13BQ9BXU2 312 aa18.51■□□□□ 0.55
HDAC6-218ENST00000470942 NEDD4P46934 1319 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 COBLO75128 1261 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-218ENST00000470942 TOP1P11387 765 aaKnown RBP18.5■□□□□ 0.55
HDAC6-218ENST00000470942 CAPN2P17655 700 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 CCND3P30281 292 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-218ENST00000470942 NOVP48745 357 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 STAT2P52630 851 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 KCTD2Q14681 263 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 CCDC96Q2M329 555 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 TMEM47Q9BQJ4 181 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 SLC38A10Q9HBR0 1119 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 RAVER2Q9HCJ3 691 aaKnown RBP18.5■□□□□ 0.55
HDAC6-218ENST00000470942 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
HDAC6-218ENST00000470942 CYP2C19P33261 490 aa18.49■□□□□ 0.55
HDAC6-218ENST00000470942 RASGRP2Q7LDG7 609 aa18.49■□□□□ 0.55
HDAC6-218ENST00000470942 DCAF4Q8WV16 495 aa18.49■□□□□ 0.55
HDAC6-218ENST00000470942 ZKSCAN3Q9BRR0 538 aa18.49■□□□□ 0.55
HDAC6-218ENST00000470942 CRISPLD2Q9H0B8 497 aa18.49■□□□□ 0.55
HDAC6-218ENST00000470942 B4E1Z4 1266 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 KDM4AO75164 1064 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 PGK2P07205 417 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 FDX1P10109 184 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 CNGA1P29973 690 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 TTC14Q96N46 770 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
HDAC6-218ENST00000470942 MKI67P46013 3256 aaKnown RBP18.47■□□□□ 0.55
HDAC6-218ENST00000470942 ATP2A1O14983 1001 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 PLA2G6O60733 806 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 PTH1RQ03431 593 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 PRPF38BQ5VTL8 546 aaKnown RBP18.47■□□□□ 0.55
HDAC6-218ENST00000470942 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 IQCA1Q86XH1 822 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 KRT23Q9C075 422 aa18.47■□□□□ 0.55
HDAC6-218ENST00000470942 SGSM2O43147 1006 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 NT5C2P49902 561 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 OAZ1P54368 228 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 UBE2Q1Q7Z7E8 422 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 DPF3Q92784 378 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 DDX11Q96FC9 970 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 MAML3Q96JK9 1138 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 CNNM2Q9H8M5 875 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 GPCPD1Q9NPB8 672 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
HDAC6-218ENST00000470942 FRMPD2Q68DX3 1309 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-218ENST00000470942 NEFLP07196 543 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 SNAP25P60880 206 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 TTBK2Q6IQ55 1244 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 ANKLE1Q8NAG6 615 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 PAWRQ96IZ0 340 aaKnown RBP18.45■□□□□ 0.54
HDAC6-218ENST00000470942 HTATIP2Q9BUP3 242 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 ZSWIM5Q9P217 1185 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
HDAC6-218ENST00000470942 FRMPD3Q5JV73 1810 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 SLC16A2P36021 539 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 ZNF792Q3KQV3 632 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 NECAB2Q7Z6G3 386 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 ANKRD35Q8N283 1001 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 CHST13Q8NET6 341 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 DIS3LQ8TF46 1054 aaKnown RBP18.44■□□□□ 0.54
HDAC6-218ENST00000470942 AGBL1Q96MI9 1066 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 ZSCAN10Q96SZ4 725 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-218ENST00000470942 KAT14Q9H8E8 782 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 FBXO40Q9UH90 709 aa18.44■□□□□ 0.54
HDAC6-218ENST00000470942 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-218ENST00000470942 IGHA2P01877 340 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 PDHBP11177 359 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 CYBAP13498 195 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 TRDNQ13061 729 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 PRAMEF19Q5SWL8 479 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 SYDE2Q5VT97 1194 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 LHX8Q68G74 356 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 KIAA1211Q6ZU35 1233 aa18.43■□□□□ 0.54
HDAC6-218ENST00000470942 UBAC1Q9BSL1 405 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms