RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 NAPBQ9H115 298 aa20.61■□□□□ 0.89
LMNA-212ENST00000470835 MTMR4Q9NYA4 1195 aa20.61■□□□□ 0.89
LMNA-212ENST00000470835 TTLL1O95922 423 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 TAL1P17542 331 aaPredicted RBP20.6■□□□□ 0.89
LMNA-212ENST00000470835 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 SNX17Q15036 470 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 TRIM60Q495X7 471 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 ZMYM1Q5SVZ6 1142 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 CPXCR1Q8N123 301 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 KIFC2Q96AC6 838 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 PRDM5Q9NQX1 630 aaPredicted RBP20.6■□□□□ 0.89
LMNA-212ENST00000470835 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 RIPK3Q9Y572 518 aa20.6■□□□□ 0.89
LMNA-212ENST00000470835 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
LMNA-212ENST00000470835 LAMA2P24043 3122 aaKnown RBP20.6■□□□□ 0.89
LMNA-212ENST00000470835 ZBED4O75132 1171 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 TSPY3P0CV98 308 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 TSPY8P0CW00 308 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 AKR1A1P14550 325 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 RRP1P56182 461 aaKnown RBP20.59■□□□□ 0.89
LMNA-212ENST00000470835 PDE4BQ07343 736 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 GMCL1P1Q8NEA9 526 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 MKL1Q969V6 931 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 CNPY2Q9Y2B0 182 aa20.59■□□□□ 0.89
LMNA-212ENST00000470835 ATP2A1O14983 1001 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 PGK1P00558 417 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.89
LMNA-212ENST00000470835 ZNF865P0CJ78 1059 aaPredicted RBP20.58■□□□□ 0.89
LMNA-212ENST00000470835 PPARAQ07869 468 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 RNF180Q86T96 592 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 NEDD1Q8NHV4 660 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 LENG1Q96BZ8 264 aaPredicted RBP20.58■□□□□ 0.89
LMNA-212ENST00000470835 SLC38A10Q9HBR0 1119 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 RAVER2Q9HCJ3 691 aaKnown RBP20.58■□□□□ 0.89
LMNA-212ENST00000470835 FEM1BQ9UK73 627 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 PHF24Q9UPV7 400 aa20.58■□□□□ 0.89
LMNA-212ENST00000470835 SALL3Q9BXA9 1300 aa20.57■□□□□ 0.88
LMNA-212ENST00000470835 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
LMNA-212ENST00000470835 PDLIM7Q9NR12 457 aa20.57■□□□□ 0.88
LMNA-212ENST00000470835 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
LMNA-212ENST00000470835 SYNGAP1Q96PV0 1343 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 BMP3P12645 472 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 TFAP4Q01664 338 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 CCDC129Q6ZRS4 1044 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
LMNA-212ENST00000470835 LRRC37A2A6NM11 1700 aa20.56■□□□□ 0.88
LMNA-212ENST00000470835 C1orf53Q5VUE5 145 aa20.55■□□□□ 0.88
LMNA-212ENST00000470835 SLC17A8Q8NDX2 589 aa20.55■□□□□ 0.88
LMNA-212ENST00000470835 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
LMNA-212ENST00000470835 ZHX1Q9UKY1 873 aaPredicted RBP20.55■□□□□ 0.88
LMNA-212ENST00000470835 SYNRGQ9UMZ2 1314 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 A0A1W2PQ45 241 aaPredicted RBP20.54■□□□□ 0.88
LMNA-212ENST00000470835 A0A1W2PQY0 241 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 FOXP2O15409 715 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 SNAI1O95863 264 aaPredicted RBP20.54■□□□□ 0.88
LMNA-212ENST00000470835 STAT2P52630 851 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 OAZ1P54368 228 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 MAMDC4Q6UXC1 1216 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.54■□□□□ 0.88
LMNA-212ENST00000470835 SH3RF1Q7Z6J0 888 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 ZNF467Q7Z7K2 595 aaPredicted RBP20.54■□□□□ 0.88
LMNA-212ENST00000470835 ANKRD35Q8N283 1001 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 CRBNQ96SW2 442 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 FBXO40Q9UH90 709 aa20.54■□□□□ 0.88
LMNA-212ENST00000470835 TMEM232C9JQI7 657 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 ADAMTS4O75173 837 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 TLE2Q04725 743 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 CHST13Q8NET6 341 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 BADQ92934 168 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 GMCL1Q96IK5 515 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 FAM184BQ9ULE4 1060 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.53■□□□□ 0.88
LMNA-212ENST00000470835 LCTP09848 1927 aa20.53■□□□□ 0.88
LMNA-212ENST00000470835 TRIM43BA6NCK2 446 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 TSPY2A6NKD2 308 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 SLC1A4P43007 532 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
LMNA-212ENST00000470835 TRIM43Q96BQ3 446 aaPredicted RBP20.52■□□□□ 0.88
LMNA-212ENST00000470835 CHMP4CQ96CF2 233 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 FGD4Q96M96 766 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.52■□□□□ 0.88
LMNA-212ENST00000470835 STX8Q9UNK0 236 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 STXBP5LQ9Y2K9 1186 aa20.52■□□□□ 0.88
LMNA-212ENST00000470835 PQBP1O60828 265 aaKnown RBP20.51■□□□□ 0.87
LMNA-212ENST00000470835 CLTBP09497 229 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 FDX1P10109 184 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 SHHQ15465 462 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 EVI5LQ96CN4 794 aa20.51■□□□□ 0.87
LMNA-212ENST00000470835 TSEN34Q9BSV6 310 aaKnown RBP20.51■□□□□ 0.87
LMNA-212ENST00000470835 NMT2O60551 498 aa20.5■□□□□ 0.87
LMNA-212ENST00000470835 MCCP23508 829 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms