RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 CFAP45Q9UL16 551 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 PCDHB6Q9Y5E3 794 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 MRVI1Q9Y6F6 885 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 SCN4AP35499 1836 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 PARP14Q460N5 1801 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
GTF3A-206ENST00000470606 CTNND1O60716 968 aaKnown RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 LMOD1P29536 600 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 KRT2P35908 639 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 SKOR2Q2VWA4 1001 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 AXDND1Q5T1B0 1012 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 KLRG1Q96E93 195 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 RRP36Q96EU6 259 aaKnown RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 ZMYND12Q9H0C1 365 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 SH3GLB2Q9NR46 395 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PTPRFP10586 1907 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 RLFQ13129 1914 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 TMEM232C9JQI7 657 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 EDIL3O43854 480 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 GRIN3BO60391 1043 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 USP2O75604 605 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 MARCKSP29966 332 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 EPHX2P34913 555 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 NLRP5P59047 1200 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PRKG1Q13976 671 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 ATL3Q6DD88 541 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 DPY19L2Q6NUT2 758 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 BTNL9Q6UXG8 535 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 GAS2L3Q86XJ1 694 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 BLIDQ8IZY5 108 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
GTF3A-206ENST00000470606 WRNIP1Q96S55 665 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 GOLPH3LQ9H4A5 285 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 VCPKMTQ9H867 229 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 FBXO28Q9NVF7 368 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 SYNPO2Q9UMS6 1093 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PCDHA6Q9UN73 950 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PCDHA4Q9UN74 947 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PCDHA8Q9Y5H6 950 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 MYH7BA7E2Y1 1941 aa9.58□□□□□ -0.88
GTF3A-206ENST00000470606 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 ZBTB5O15062 677 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 BMP3P12645 472 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 PTMSP20962 102 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 GRIN1Q05586 938 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 SLC39A14Q15043 492 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
GTF3A-206ENST00000470606 DAGLBQ8NCG7 672 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 WDR90Q96KV7 1748 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 TAF1DQ9H5J8 278 aaPredicted RBP9.57□□□□□ -0.88
GTF3A-206ENST00000470606 ARHGEF10LQ9HCE6 1279 aa9.57□□□□□ -0.88
GTF3A-206ENST00000470606 SMCO2A6NFE2 343 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 OPLAHO14841 1288 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 SPTLC2O15270 562 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 NR1I2O75469 434 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 YEATS4O95619 227 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 XBP1P17861 261 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 PTPRAP18433 802 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ATP2B1P20020 1258 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 NAPAP54920 295 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 FMR1Q06787 632 aaKnown RBP eCLIP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 CDC37Q16543 378 aaPredicted RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ZSCAN23Q3MJ62 389 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 PIK3AP1Q6ZUJ8 805 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 MOB2Q70IA6 237 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 SCYL3Q8IZE3 742 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 P2RX7Q99572 595 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 TMEM260Q9NX78 707 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 PRR12Q9ULL5 1215 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 MBD3O95983 291 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ME1P48163 572 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 SPP2Q13103 211 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 RILPL1Q5EBL4 403 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 SYDE2Q5VT97 1194 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 DCAF15Q66K64 600 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 KRT26Q7Z3Y9 468 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ENGASEQ8NFI3 743 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 CLIC6Q96NY7 704 aa9.56□□□□□ -0.88
GTF3A-206ENST00000470606 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 SEC63Q9UGP8 760 aaKnown RBP9.56□□□□□ -0.88
GTF3A-206ENST00000470606 ESYT2A0FGR8 921 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 CALML3P27482 149 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 SNW1Q13573 536 aaKnown RBP9.55□□□□□ -0.88
GTF3A-206ENST00000470606 MTMR2Q13614 643 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 GSE1Q14687 1217 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 STK38Q15208 465 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms