RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GRM4Q14833 912 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 CYP26C1Q6V0L0 522 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 DISC1Q9NRI5 854 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 PRCPP42785 496 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 USP5P45974 858 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 C12orf60Q5U649 245 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 CCSER1Q9C0I3 900 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 TCP11L1Q9NUJ3 509 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 A0A1W2PQC6 194 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 MAP2K7O14733 419 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 SLC35G1Q2M3R5 365 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 ZNF569Q5MCW4 686 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 WWC2Q6AWC2 1192 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 TYW1BQ6NUM6 668 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 MSL3Q8N5Y2 521 aaKnown RBP15.4■□□□□ 0.06
BRCA1-209ENST00000470026 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 VPS16Q9H269 839 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 KAT14Q9H8E8 782 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 ANKZF1Q9H8Y5 726 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 TAB2Q9NYJ8 693 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
BRCA1-209ENST00000470026 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 KCNQ2O43526 872 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 KLRC4O43908 158 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 GNAQP50148 359 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 CCDC178Q5BJE1 867 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 ACRBPQ8NEB7 543 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 KBTBD4Q9NVX7 518 aa15.39■□□□□ 0.05
BRCA1-209ENST00000470026 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-209ENST00000470026 A0A0G2JS52 829 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 CTAGE9A4FU28 777 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 RHOBTB3O94955 611 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 PRPHP41219 470 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 STAT6P42226 847 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 TFAP4Q01664 338 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 SLC35F6Q8N357 371 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 STAG2Q8N3U4 1231 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 PNMA1Q8ND90 353 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 NLRP3Q96P20 1036 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 THAP9Q9H5L6 903 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 MAD2L2Q9UI95 211 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 PCDHA6Q9UN73 950 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 PCDHA8Q9Y5H6 950 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 LAD1O00515 517 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 COBLO75128 1261 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
BRCA1-209ENST00000470026 USP17L8P0C7I0 530 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 EEF1GP26641 437 aaKnown RBP15.38■□□□□ 0.05
BRCA1-209ENST00000470026 GTF2E1P29083 439 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-209ENST00000470026 CDC25AP30304 524 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 TM4SF1P30408 202 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 KRT9P35527 623 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 AMPD2Q01433 879 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 WHAMMP3Q1A5X7 153 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 LONRF2Q1L5Z9 754 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 SPTY2D1Q68D10 685 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-209ENST00000470026 NAPGQ99747 312 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-209ENST00000470026 MCM9Q9NXL9 1143 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 NARFQ9UHQ1 456 aa15.38■□□□□ 0.05
BRCA1-209ENST00000470026 CCDC66A2RUB6 948 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 ABL1P00519 1130 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 SMC1AQ14683 1233 aaKnown RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 ZNF662Q6ZS27 426 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 TXNRD3Q86VQ6 643 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 DNAJC7Q99615 494 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 TMEM60Q9H2L4 133 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 SBF2Q86WG5 1849 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 CYTH3O43739 400 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 BEND6Q5SZJ8 279 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-209ENST00000470026 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 BARHL2Q9NY43 387 aa15.37■□□□□ 0.05
BRCA1-209ENST00000470026 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-209ENST00000470026 STXBP3O00186 592 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 PMS1P54277 932 aaKnown RBP15.36■□□□□ 0.05
BRCA1-209ENST00000470026 PPP4CP60510 307 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 TTI2Q6NXR4 508 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 NOC3LQ8WTT2 800 aaKnown RBP15.36■□□□□ 0.05
BRCA1-209ENST00000470026 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 MAGEF1Q9HAY2 307 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 FLT1P17948 1338 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 MYH1P12882 1939 aa15.36■□□□□ 0.05
BRCA1-209ENST00000470026 CCDC194A0A1B0GVG4 234 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms