RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.79■□□□□ 0.92
SMC4-211ENST00000469858 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 SNW1Q13573 536 aaKnown RBP20.79■□□□□ 0.92
SMC4-211ENST00000469858 MAP3K11Q16584 847 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 ADGRF4Q8IZF3 695 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 ENGASEQ8NFI3 743 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 RASGRP4Q8TDF6 673 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 RBSNQ9H1K0 784 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 CEP131Q9UPN4 1083 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 ATAD5Q96QE3 1844 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 F5H6K3 240 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 KLRC3Q07444 240 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 GALNT17Q6IS24 598 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 FAM177A1Q8N128 213 aaPredicted RBP20.78■□□□□ 0.92
SMC4-211ENST00000469858 GMCL1P1Q8NEA9 526 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 JMJD4Q9H9V9 463 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
SMC4-211ENST00000469858 H7C1D1 291 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 WNT7AO00755 349 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 KINO60870 393 aaKnown RBP20.77■□□□□ 0.92
SMC4-211ENST00000469858 NDUFA8P51970 172 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 DAGLBQ8NCG7 672 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 CLIC6Q96NY7 704 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 ZMYND12Q9H0C1 365 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 A0A1W2PRG0 241 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 CMA1P23946 247 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 TTC38Q5R3I4 469 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 CKAP2LQ8IYA6 745 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 KRI1Q8N9T8 703 aaKnown RBP20.77■□□□□ 0.92
SMC4-211ENST00000469858 ARHGEF10LQ9HCE6 1279 aa20.77■□□□□ 0.92
SMC4-211ENST00000469858 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 M0R2N6 131 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 CUTAO60888 179 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 NDUFB10O96000 172 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 FMR1NBQ8N0W7 255 aaPredicted RBP20.76■□□□□ 0.91
SMC4-211ENST00000469858 GPC2Q8N158 579 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 TEPSINQ96N21 525 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 PANK2Q9BZ23 570 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 PCDHA6Q9UN73 950 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 PCDHA8Q9Y5H6 950 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 CCDC194A0A1B0GVG4 234 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 SMCO2A6NFE2 343 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 hCG_1984214I3L0E3 225 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 PFKFB1P16118 471 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 CAP2P40123 477 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 ECE1P42892 770 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 SHC4Q6S5L8 630 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 ZNF713Q8N859 430 aaPredicted RBP20.76■□□□□ 0.91
SMC4-211ENST00000469858 COA7Q96BR5 231 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 NUP88Q99567 741 aaPredicted RBP20.76■□□□□ 0.91
SMC4-211ENST00000469858 C6orf50Q9HD87 102 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
SMC4-211ENST00000469858 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.76■□□□□ 0.91
SMC4-211ENST00000469858 PNMA6FA0A0J9YX94 578 aa20.75■□□□□ 0.91
SMC4-211ENST00000469858 ZNF174Q15697 407 aa20.75■□□□□ 0.91
SMC4-211ENST00000469858 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
SMC4-211ENST00000469858 FBXO2Q9UK22 296 aaPredicted RBP20.75■□□□□ 0.91
SMC4-211ENST00000469858 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
SMC4-211ENST00000469858 GNA11P29992 359 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 TRAPPC10P48553 1259 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 MAP3K10Q02779 954 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 RNF214Q8ND24 703 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 TRPM4Q8TD43 1214 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 ACER1Q8TDN7 264 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 FUCA2Q9BTY2 467 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 DEFB129Q9H1M3 183 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 ZBTB5O15062 677 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 YBX3P16989 372 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMC4-211ENST00000469858 PTPREP23469 700 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 RBM43Q6ZSC3 357 aaKnown RBP20.74■□□□□ 0.91
SMC4-211ENST00000469858 SPICE1Q8N0Z3 855 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 SYNPO2Q9UMS6 1093 aa20.74■□□□□ 0.91
SMC4-211ENST00000469858 PPP1R11O60927 126 aaPredicted RBP20.73■□□□□ 0.91
SMC4-211ENST00000469858 BMP15O95972 392 aa20.73■□□□□ 0.91
SMC4-211ENST00000469858 GRIN1Q05586 938 aa20.73■□□□□ 0.91
SMC4-211ENST00000469858 RESP18Q5W5W9 173 aa20.73■□□□□ 0.91
SMC4-211ENST00000469858 MTMR8Q96EF0 704 aa20.73■□□□□ 0.91
SMC4-211ENST00000469858 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
SMC4-211ENST00000469858 ESYT2A0FGR8 921 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 BMP3P12645 472 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 IKQ13123 557 aaPredicted RBP20.72■□□□□ 0.91
SMC4-211ENST00000469858 ANGEL2Q5VTE6 544 aaKnown RBP20.72■□□□□ 0.91
SMC4-211ENST00000469858 TMX2Q9Y320 296 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 SRPRBQ9Y5M8 271 aaKnown RBP20.72■□□□□ 0.91
SMC4-211ENST00000469858 CTAGE5O15320 804 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 ZNF202O95125 648 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 ASNSP08243 561 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 MCM7P33993 719 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 EPS15P42566 896 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 INF2Q27J81 1249 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 SPECC1Q5M775 1068 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 GOPCQ9HD26 462 aa20.72■□□□□ 0.91
SMC4-211ENST00000469858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.71■□□□□ 0.91
SMC4-211ENST00000469858 PHF20L1A8MW92 1017 aa20.71■□□□□ 0.91
SMC4-211ENST00000469858 TMEM232C9JQI7 657 aa20.71■□□□□ 0.91
SMC4-211ENST00000469858 SYKP43405 635 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms