RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TSPY2A6NKD2 308 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 MCM2P49736 904 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 HAND2P61296 217 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 DPP9Q86TI2 863 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 RUFY2Q8WXA3 655 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 DPF3Q92784 378 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 MKL1Q969V6 931 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 ANAPC4Q9UJX5 808 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 HIP1O00291 1037 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 SGSM2O43147 1006 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 RANBP6O60518 1105 aaKnown RBP20.69■□□□□ 0.9
MRPL28-208ENST00000469744 CD2BP2O95400 341 aaKnown RBP20.69■□□□□ 0.9
MRPL28-208ENST00000469744 HOXC6P09630 235 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 CYP2C19P33261 490 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 CWC27Q6UX04 472 aaKnown RBP20.69■□□□□ 0.9
MRPL28-208ENST00000469744 REPS2Q8NFH8 660 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 MROH8Q9H579 483 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 TOMM22Q9NS69 142 aa20.69■□□□□ 0.9
MRPL28-208ENST00000469744 ZNF214Q9UL59 606 aaPredicted RBP20.69■□□□□ 0.9
MRPL28-208ENST00000469744 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
MRPL28-208ENST00000469744 FRMPD3Q5JV73 1810 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 COBLO75128 1261 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 RRP12Q5JTH9 1297 aaKnown RBP20.68■□□□□ 0.9
MRPL28-208ENST00000469744 MFSD14CQ5VZR4 134 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 TICAM2Q86XR7 235 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 KIFC2Q96AC6 838 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 PAWRQ96IZ0 340 aaKnown RBP20.68■□□□□ 0.9
MRPL28-208ENST00000469744 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 DIAPH3Q9NSV4 1193 aa20.68■□□□□ 0.9
MRPL28-208ENST00000469744 ALPK3Q96L96 1907 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 STRNO43815 780 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
MRPL28-208ENST00000469744 STAT3P40763 770 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 SLFN13Q68D06 897 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 RIOX2Q8IUF8 465 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 GMCL1P1Q8NEA9 526 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 ANO2Q9NQ90 1003 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 STX8Q9UNK0 236 aa20.67■□□□□ 0.9
MRPL28-208ENST00000469744 PLXNA1Q9UIW2 1896 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 H0YGN5 161 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 ORC4O43929 436 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 SLC25A27O95847 323 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 FCER1AP12319 257 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 PRPF38AQ8NAV1 312 aaKnown RBP20.66■□□□□ 0.9
MRPL28-208ENST00000469744 SPRYD3Q8NCJ5 442 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 HTATIP2Q9BUP3 242 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 MTMR7Q9Y216 660 aa20.66■□□□□ 0.9
MRPL28-208ENST00000469744 CNGA1P29973 690 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
MRPL28-208ENST00000469744 CPXCR1Q8N123 301 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 MMP19Q99542 508 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 OGDHLQ9ULD0 1010 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 SYNPO2Q9UMS6 1093 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 LAMA4Q16363 1823 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 ZMYM6O95789 1325 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 RAD50Q92878 1312 aa20.65■□□□□ 0.9
MRPL28-208ENST00000469744 PGK2P07205 417 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 HSP90AA1P07900 732 aaKnown RBP20.64■□□□□ 0.89
MRPL28-208ENST00000469744 BMP3P12645 472 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 HSPA4P34932 840 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 LHX8Q68G74 356 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
MRPL28-208ENST00000469744 TBC1D10CQ8IV04 446 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 ABRAQ8N0Z2 381 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 TRPV1Q8NER1 839 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 FEM1BQ9UK73 627 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 RIPK3Q9Y572 518 aa20.64■□□□□ 0.89
MRPL28-208ENST00000469744 FGRP09769 529 aa20.63■□□□□ 0.89
MRPL28-208ENST00000469744 NECAB2Q7Z6G3 386 aa20.63■□□□□ 0.89
MRPL28-208ENST00000469744 TEX13BQ9BXU2 312 aa20.63■□□□□ 0.89
MRPL28-208ENST00000469744 RAVER2Q9HCJ3 691 aaKnown RBP20.63■□□□□ 0.89
MRPL28-208ENST00000469744 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 IGHA2P01877 340 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
MRPL28-208ENST00000469744 OLFML2BQ68BL8 750 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 ANKLE1Q8NAG6 615 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 IL25Q9H293 177 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 CTDP1Q9Y5B0 961 aaPredicted RBP20.62■□□□□ 0.89
MRPL28-208ENST00000469744 ZBED4O75132 1171 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 CYBAP13498 195 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 CAPN2P17655 700 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 MCM4P33991 863 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 SLC1A4P43007 532 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 KCTD2Q14681 263 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 KIAA1211Q6ZU35 1233 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 GMCL1Q96IK5 515 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 MAML3Q96JK9 1138 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
MRPL28-208ENST00000469744 SLC38A10Q9HBR0 1119 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
MRPL28-208ENST00000469744 NEDD4P46934 1319 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 STAT2P52630 851 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 PRAMEF19Q5SWL8 479 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 AKNAD1Q5T1N1 836 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 ANO1Q5XXA6 986 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 MFSD6Q6ZSS7 791 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms