RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SMIM22K7EJ46 135 aa22■■□□□ 1.11
TTC28-205ENST00000469670 RAD21O60216 631 aa22■■□□□ 1.11
TTC28-205ENST00000469670 CDK7P50613 346 aa22■■□□□ 1.11
TTC28-205ENST00000469670 FAM83BQ5T0W9 1011 aa22■■□□□ 1.11
TTC28-205ENST00000469670 KANSL2Q9H9L4 492 aa22■■□□□ 1.11
TTC28-205ENST00000469670 GOPCQ9HD26 462 aa22■■□□□ 1.11
TTC28-205ENST00000469670 CYP2D7A0A087X1C5 515 aa21.99■■□□□ 1.11
TTC28-205ENST00000469670 DUSP11O75319 330 aaKnown RBP21.99■■□□□ 1.11
TTC28-205ENST00000469670 CSF2RAP15509 400 aa21.99■■□□□ 1.11
TTC28-205ENST00000469670 CST5P28325 142 aaPredicted RBP21.99■■□□□ 1.11
TTC28-205ENST00000469670 C12orf60Q5U649 245 aa21.99■■□□□ 1.11
TTC28-205ENST00000469670 TMEM199Q8N511 208 aa21.99■■□□□ 1.11
TTC28-205ENST00000469670 ADAMTS19Q8TE59 1207 aa21.99■■□□□ 1.11
TTC28-205ENST00000469670 ZNFX1Q9P2E3 1918 aaKnown RBP21.99■■□□□ 1.11
TTC28-205ENST00000469670 MBD4O95243 580 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 C6orf222P0C671 652 aaPredicted RBP21.98■■□□□ 1.11
TTC28-205ENST00000469670 ACRP10323 421 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 IRX5P78411 483 aaPredicted RBP21.98■■□□□ 1.11
TTC28-205ENST00000469670 MRPS5P82675 430 aaKnown RBP21.98■■□□□ 1.11
TTC28-205ENST00000469670 PSRC1Q6PGN9 363 aaPredicted RBP21.98■■□□□ 1.11
TTC28-205ENST00000469670 MAMDC4Q6UXC1 1216 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 C16orf86Q6ZW13 317 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 AMOTL1Q8IY63 956 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 PCSK9Q8NBP7 692 aaKnown RBP21.98■■□□□ 1.11
TTC28-205ENST00000469670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.98■■□□□ 1.11
TTC28-205ENST00000469670 VTI1AQ96AJ9 217 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 DDX11Q96FC9 970 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 TEX13BQ9BXU2 312 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 PARP14Q460N5 1801 aa21.98■■□□□ 1.11
TTC28-205ENST00000469670 USP17L12C9JPN9 530 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 USP17L21D6R901 530 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 ASGR1P07306 291 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 ADGRE1Q14246 886 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 CCDC85BQ15834 202 aaPredicted RBP21.97■■□□□ 1.11
TTC28-205ENST00000469670 SNRNP48Q6IEG0 339 aaKnown RBP21.97■■□□□ 1.11
TTC28-205ENST00000469670 RHPN1Q8TCX5 695 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 UHRF1Q96T88 793 aaPredicted RBP21.97■■□□□ 1.11
TTC28-205ENST00000469670 PPP1R12CQ9BZL4 782 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 SPC25Q9HBM1 224 aa21.97■■□□□ 1.11
TTC28-205ENST00000469670 DNAJC25-GNG10A0A024R161 153 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 A0A0U1RQG5 324 aaPredicted RBP21.96■■□□□ 1.11
TTC28-205ENST00000469670 ARVCFO00192 962 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 RLBP1P12271 317 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 IGFBP4P22692 258 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 ACVR2BQ13705 512 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 RAB30Q15771 203 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 SLFNL1Q499Z3 407 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 HSP90AB4PQ58FF6 505 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 SLF1Q9BQI6 1058 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 MSRAQ9UJ68 235 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 RIPK3Q9Y572 518 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 COL11A1P12107 1806 aaPredicted RBP21.96■■□□□ 1.11
TTC28-205ENST00000469670 PLXNA1Q9UIW2 1896 aa21.96■■□□□ 1.11
TTC28-205ENST00000469670 APBB1O00213 710 aa21.95■■□□□ 1.1
TTC28-205ENST00000469670 TLR3O15455 904 aaKnown RBP21.95■■□□□ 1.1
TTC28-205ENST00000469670 ADCY6O43306 1168 aa21.95■■□□□ 1.1
TTC28-205ENST00000469670 ADD2P35612 726 aa21.95■■□□□ 1.1
TTC28-205ENST00000469670 ZNF467Q7Z7K2 595 aaPredicted RBP21.95■■□□□ 1.1
TTC28-205ENST00000469670 FAM126BQ8IXS8 530 aa21.95■■□□□ 1.1
TTC28-205ENST00000469670 NUP88Q99567 741 aaPredicted RBP21.95■■□□□ 1.1
TTC28-205ENST00000469670 UPF3AQ9H1J1 476 aaKnown RBP21.95■■□□□ 1.1
TTC28-205ENST00000469670 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.95■■□□□ 1.1
TTC28-205ENST00000469670 GJA9P57773 515 aa21.94■■□□□ 1.1
TTC28-205ENST00000469670 CLASRPQ8N2M8 674 aaKnown RBP21.94■■□□□ 1.1
TTC28-205ENST00000469670 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
TTC28-205ENST00000469670 HERVK_113Q902F9 699 aa21.94■■□□□ 1.1
TTC28-205ENST00000469670 DDRGK1Q96HY6 314 aa21.94■■□□□ 1.1
TTC28-205ENST00000469670 IL23AQ9NPF7 189 aa21.94■■□□□ 1.1
TTC28-205ENST00000469670 SLC4A3P48751 1232 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 CCDC144BQ3MJ40 725 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 GNASQ5JWF2 1037 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.93■■□□□ 1.1
TTC28-205ENST00000469670 NKX2-4Q9H2Z4 354 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 ABHD16BQ9H3Z7 469 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 PAG1Q9NWQ8 432 aa21.93■■□□□ 1.1
TTC28-205ENST00000469670 IFIT2P09913 472 aaKnown RBP21.92■■□□□ 1.1
TTC28-205ENST00000469670 CYP2C18P33260 490 aa21.92■■□□□ 1.1
TTC28-205ENST00000469670 PLA2G5P39877 138 aa21.92■■□□□ 1.1
TTC28-205ENST00000469670 CPXCR1Q8N123 301 aa21.92■■□□□ 1.1
TTC28-205ENST00000469670 MTIF3Q9H2K0 278 aaKnown RBP21.92■■□□□ 1.1
TTC28-205ENST00000469670 SLC28A3Q9HAS3 691 aa21.92■■□□□ 1.1
TTC28-205ENST00000469670 CXXC1Q9P0U4 656 aaPredicted RBP21.92■■□□□ 1.1
TTC28-205ENST00000469670 MYH8P13535 1937 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 ATP2A1O14983 1001 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 CD4P01730 458 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 CTR9Q6PD62 1173 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 PRPF38AQ8NAV1 312 aaKnown RBP21.91■■□□□ 1.1
TTC28-205ENST00000469670 KIF1BPQ96EK5 621 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 FGD4Q96M96 766 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.91■■□□□ 1.1
TTC28-205ENST00000469670 YBX2Q9Y2T7 364 aaKnown RBP21.91■■□□□ 1.1
TTC28-205ENST00000469670 SLC4A4Q9Y6R1 1079 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 CHD9Q3L8U1 2897 aa21.91■■□□□ 1.1
TTC28-205ENST00000469670 ZBED9Q6R2W3 1325 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 F5H6K3 240 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 ZBED4O75132 1171 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 FGBP02675 491 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 CHGBP05060 677 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 KLRC3Q07444 240 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms