RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PROCP04070 461 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 CYP11A1P05108 521 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 CELA3AP09093 270 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 CCDC85BQ15834 202 aaPredicted RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 TSNAXIP1Q2TAA8 658 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 SLC4A10Q6U841 1118 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 IGF2-ASQ6U949 168 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 FTSJ3Q8IY81 847 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 SMARCC1Q92922 1105 aaPredicted RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 CRBNQ96SW2 442 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 TRIM56Q9BRZ2 755 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 NOC4LQ9BVI4 516 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 BACH2Q9BYV9 841 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 PHAXQ9H814 394 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 HEG1Q9ULI3 1381 aa5.15□□□□□ -1.59
TMEM39A-204ENST00000468545 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 SCN11AQ9UI33 1791 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 F6X3S4 739 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 STARD3NLO95772 234 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 ZNF157P51786 506 aaPredicted RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 NLRP12P59046 1061 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 GRIK4Q16099 956 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 PROSER3Q2NL68 480 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 LDLRAD1Q5T700 205 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 NPM2Q86SE8 214 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 SULF2Q8IWU5 870 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 DZIP1LQ8IYY4 767 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 TMEM87AQ8NBN3 555 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 EXOC6Q8TAG9 804 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 TEX13AQ9BXU3 409 aaPredicted RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 CHMP4AQ9BY43 222 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 API5Q9BZZ5 524 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 MRPL18Q9H0U6 180 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 KCNK4Q9NYG8 393 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 DBF4Q9UBU7 674 aaPredicted RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 CCNL1Q9UK58 526 aaPredicted RBP5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 SAMM50Q9Y512 469 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 LRRC37A3O60309 1634 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 BCL9O00512 1426 aa5.14□□□□□ -1.59
TMEM39A-204ENST00000468545 WNK3Q9BYP7 1800 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 C9orf172C9J069 976 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 DDX3YO15523 660 aaKnown RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 WISP1O95388 367 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 HOXB7P09629 217 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 CYP19A1P11511 503 aaPredicted RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 RLBP1P12271 317 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 TRIM27P14373 513 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 SELPP16109 830 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 NME2P22392 152 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 NRG1Q02297 640 aaPredicted RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 ITPK1Q13572 414 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 POU4F3Q15319 338 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 HP1BP3Q5SSJ5 553 aaPredicted RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 SHISA2Q6UWI4 295 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 ATF7IPQ6VMQ6 1270 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 SMIM5Q71RC9 77 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 COPS6Q7L5N1 327 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 ITPRIPQ8IWB1 547 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 TMEM57Q8N5G2 664 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 UBASH3BQ8TF42 649 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 XAGE3Q8WTP9 111 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 LENG1Q96BZ8 264 aaPredicted RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 CORO1BQ9BR76 489 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 USP26Q9BXU7 913 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 EMILIN2Q9BXX0 1053 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 METTL5Q9NRN9 209 aaKnown RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 HYPKQ9NX55 129 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 SOS1Q07889 1333 aaPredicted RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 KIF16BQ96L93 1317 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 VIRMAQ69YN4 1812 aaKnown RBP5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 PALLDQ8WX93 1383 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 RGS12O14924 1447 aa5.13□□□□□ -1.59
TMEM39A-204ENST00000468545 THSD7AQ9UPZ6 1657 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 TOGARAM1Q9Y4F4 1720 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 ITGB4P16144 1822 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 LOC100289279A0A1B0GTE1 492 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 PI4KAP2A4QPH2 592 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 SCAMP3O14828 347 aaKnown RBP5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 PAGE1O75459 146 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 DDX58O95786 925 aaKnown RBP5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 GSTP1P09211 210 aaKnown RBP5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 MAOBP27338 520 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 DUOXA2Q1HG44 320 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 PCNX4Q63HM2 1172 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 TTLL7Q6ZT98 887 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 ACAD11Q709F0 780 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 HS2ST1Q7LGA3 356 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 PI4KAP1Q8N8J0 262 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 LINC00116Q8NCU8 138 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 ZBTB1Q9Y2K1 713 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 MAP3K2Q9Y2U5 619 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 RNF123Q5XPI4 1314 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 MRC1P22897 1456 aa5.12□□□□□ -1.59
TMEM39A-204ENST00000468545 DOT1LQ8TEK3 1739 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 KDM3BQ7LBC6 1761 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 BRWD3Q6RI45 1802 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 F8W735 103 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms