RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 USP17L21D6R901 530 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 ADCY6O43306 1168 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 CHGBP05060 677 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 ACRP10323 421 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 AKNAD1Q5T1N1 836 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 MAMDC4Q6UXC1 1216 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 ATXN2LQ8WWM7 1075 aaKnown RBP22.53■■□□□ 1.2
LINC00888-201ENST00000468380 ASB2Q96Q27 587 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 GAS2L1Q99501 681 aaPredicted RBP22.53■■□□□ 1.2
LINC00888-201ENST00000468380 ATP8A2Q9NTI2 1148 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 NCOR1O75376 2440 aa22.53■■□□□ 1.2
LINC00888-201ENST00000468380 DNAJC25-GNG10A0A024R161 153 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 DUSP11O75319 330 aaKnown RBP22.52■■□□□ 1.2
LINC00888-201ENST00000468380 MBD4O95243 580 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 PPIGQ13427 754 aaKnown RBP eCLIP22.52■■□□□ 1.2
LINC00888-201ENST00000468380 CCDC129Q6ZRS4 1044 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 C16orf86Q6ZW13 317 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 ZNF365Q70YC5 407 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 ERC1Q8IUD2 1116 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 MSL3Q8N5Y2 521 aaKnown RBP22.52■■□□□ 1.2
LINC00888-201ENST00000468380 RHPN1Q8TCX5 695 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.52■■□□□ 1.2
LINC00888-201ENST00000468380 KANSL2Q9H9L4 492 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 ELP1O95163 1332 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 SYNGAP1Q96PV0 1343 aa22.52■■□□□ 1.2
LINC00888-201ENST00000468380 BAZ2AQ9UIF9 1905 aaKnown RBP22.51■■□□□ 1.19
LINC00888-201ENST00000468380 ASGR1P07306 291 aa22.51■■□□□ 1.19
LINC00888-201ENST00000468380 CCDC85BQ15834 202 aaPredicted RBP22.51■■□□□ 1.19
LINC00888-201ENST00000468380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.51■■□□□ 1.19
LINC00888-201ENST00000468380 NUP88Q99567 741 aaPredicted RBP22.51■■□□□ 1.19
LINC00888-201ENST00000468380 ZHX1Q9UKY1 873 aaPredicted RBP22.51■■□□□ 1.19
LINC00888-201ENST00000468380 RAD21O60216 631 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 CST5P28325 142 aaPredicted RBP22.5■■□□□ 1.19
LINC00888-201ENST00000468380 COPB2P35606 906 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 GLT1D1Q96MS3 346 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 GOPCQ9HD26 462 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 THEGQ9P2T0 379 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 MYH8P13535 1937 aa22.5■■□□□ 1.19
LINC00888-201ENST00000468380 ARVCFO00192 962 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 C6orf222P0C671 652 aaPredicted RBP22.49■■□□□ 1.19
LINC00888-201ENST00000468380 ADD2P35612 726 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 ACVR2BQ13705 512 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 SNRNP48Q6IEG0 339 aaKnown RBP22.49■■□□□ 1.19
LINC00888-201ENST00000468380 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
LINC00888-201ENST00000468380 ADAMTS19Q8TE59 1207 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 VTI1AQ96AJ9 217 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 DDX11Q96FC9 970 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 FGD4Q96M96 766 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 PPP1R12CQ9BZL4 782 aa22.49■■□□□ 1.19
LINC00888-201ENST00000468380 CXXC1Q9P0U4 656 aaPredicted RBP22.49■■□□□ 1.19
LINC00888-201ENST00000468380 CTAGE5O15320 804 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 FAM126BQ8IXS8 530 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 TMEM199Q8N511 208 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 SLF1Q9BQI6 1058 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 TEX13BQ9BXU2 312 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 UPF3AQ9H1J1 476 aaKnown RBP22.48■■□□□ 1.19
LINC00888-201ENST00000468380 BDP1A6H8Y1 2624 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 MROH7Q68CQ1 1323 aa22.48■■□□□ 1.19
LINC00888-201ENST00000468380 CHD7Q9P2D1 2997 aa22.47■■□□□ 1.19
LINC00888-201ENST00000468380 IGFBP4P22692 258 aa22.47■■□□□ 1.19
LINC00888-201ENST00000468380 CYP2C18P33260 490 aa22.47■■□□□ 1.19
LINC00888-201ENST00000468380 GJA9P57773 515 aa22.47■■□□□ 1.19
LINC00888-201ENST00000468380 MRPS5P82675 430 aaKnown RBP22.47■■□□□ 1.19
LINC00888-201ENST00000468380 CCDC144BQ3MJ40 725 aa22.47■■□□□ 1.19
LINC00888-201ENST00000468380 PCSK9Q8NBP7 692 aaKnown RBP22.47■■□□□ 1.19
LINC00888-201ENST00000468380 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.47■■□□□ 1.19
LINC00888-201ENST00000468380 A0A0U1RQG5 324 aaPredicted RBP22.46■■□□□ 1.19
LINC00888-201ENST00000468380 APBB1O00213 710 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 SLC4A3P48751 1232 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 GNASQ5JWF2 1037 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 CCDC174Q6PII3 467 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 ZNF467Q7Z7K2 595 aaPredicted RBP22.46■■□□□ 1.19
LINC00888-201ENST00000468380 HERVK_113Q902F9 699 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 UHRF1Q96T88 793 aaPredicted RBP22.46■■□□□ 1.19
LINC00888-201ENST00000468380 NKX2-4Q9H2Z4 354 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 PAG1Q9NWQ8 432 aa22.46■■□□□ 1.19
LINC00888-201ENST00000468380 YBX2Q9Y2T7 364 aaKnown RBP22.46■■□□□ 1.19
LINC00888-201ENST00000468380 CD4P01730 458 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 PSRC1Q6PGN9 363 aaPredicted RBP22.45■■□□□ 1.18
LINC00888-201ENST00000468380 CPXCR1Q8N123 301 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
LINC00888-201ENST00000468380 BCL11AQ9H165 835 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 BOLA2Q9H3K6 86 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 IL23AQ9NPF7 189 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 MSRAQ9UJ68 235 aa22.45■■□□□ 1.18
LINC00888-201ENST00000468380 F5H6K3 240 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 ATP2A1O14983 1001 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 KLRC3Q07444 240 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 HSP90AB4PQ58FF6 505 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 NECAB3Q96P71 396 aaPredicted RBP22.44■■□□□ 1.18
LINC00888-201ENST00000468380 KATNBL1Q9H079 304 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 ABHD16BQ9H3Z7 469 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 SLC4A4Q9Y6R1 1079 aa22.44■■□□□ 1.18
LINC00888-201ENST00000468380 MCM3APO60318 1980 aa22.43■■□□□ 1.18
LINC00888-201ENST00000468380 REV3LO60673 3130 aa22.43■■□□□ 1.18
LINC00888-201ENST00000468380 UMODL1Q5DID0 1318 aa22.43■■□□□ 1.18
LINC00888-201ENST00000468380 NDUFB10O96000 172 aa22.43■■□□□ 1.18
LINC00888-201ENST00000468380 IFIT2P09913 472 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms