RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 ARL4AP40617 200 aa8.86□□□□□ -0.99
SGIP1-207ENST00000468286 LAPTM5Q13571 262 aa8.86□□□□□ -0.99
SGIP1-207ENST00000468286 GALNT18Q6P9A2 607 aa8.86□□□□□ -0.99
SGIP1-207ENST00000468286 PHC3Q8NDX5 983 aa8.86□□□□□ -0.99
SGIP1-207ENST00000468286 CHURC1-FNTBB4DL54 471 aa8.85□□□□□ -0.99
SGIP1-207ENST00000468286 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
SGIP1-207ENST00000468286 RNF4P78317 190 aa8.85□□□□□ -0.99
SGIP1-207ENST00000468286 BBS9Q3SYG4 887 aa8.85□□□□□ -0.99
SGIP1-207ENST00000468286 TMC6Q7Z403 805 aa8.85□□□□□ -0.99
SGIP1-207ENST00000468286 SSU72P8A0A1W2PR75 194 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 INSRRP14616 1297 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 CBX2Q14781 532 aaPredicted RBP8.84□□□□□ -0.99
SGIP1-207ENST00000468286 RTP5Q14D33 572 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 HHIPL2Q6UWX4 724 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 PHACTR4Q8IZ21 702 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 GATAD2BQ8WXI9 593 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 FCRL2Q96LA5 508 aaPredicted RBP8.84□□□□□ -0.99
SGIP1-207ENST00000468286 KRTAP9-8Q9BYQ0 159 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 KLHL3Q9UH77 587 aa8.84□□□□□ -0.99
SGIP1-207ENST00000468286 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
SGIP1-207ENST00000468286 WTIPA6NIX2 430 aaPredicted RBP8.83□□□□□ -1
SGIP1-207ENST00000468286 FADS2P1A8MWK0 482 aa8.83□□□□□ -1
SGIP1-207ENST00000468286 ST13P50502 369 aaKnown RBP8.83□□□□□ -1
SGIP1-207ENST00000468286 BNC2Q6ZN30 1099 aaPredicted RBP8.83□□□□□ -1
SGIP1-207ENST00000468286 TAF6LQ9Y6J9 622 aa8.83□□□□□ -1
SGIP1-207ENST00000468286 WDR62O43379 1518 aa8.83□□□□□ -1
SGIP1-207ENST00000468286 ARAP1Q96P48 1450 aa8.83□□□□□ -1
SGIP1-207ENST00000468286 FFAR3O14843 346 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 PRICKLE3O43900 615 aaPredicted RBP8.82□□□□□ -1
SGIP1-207ENST00000468286 BUB1BO60566 1050 aaPredicted RBP8.82□□□□□ -1
SGIP1-207ENST00000468286 HTR3BO95264 441 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 KCNC1P48547 511 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 CHMP4BP1P59074 171 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 PUM1Q14671 1186 aaKnown RBP eCLIP8.82□□□□□ -1
SGIP1-207ENST00000468286 HSF5Q4G112 596 aaPredicted RBP8.82□□□□□ -1
SGIP1-207ENST00000468286 CYB5RLQ6IPT4 315 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 KIF2CQ99661 725 aa8.82□□□□□ -1
SGIP1-207ENST00000468286 RGS13O14921 159 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 SYPP08247 313 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 GBP1P32455 592 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 SLURP1P55000 103 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 LMNB2Q03252 620 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 NLGN1Q8N2Q7 840 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 GPR20Q99678 358 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 TNFRSF12AQ9NP84 129 aa8.81□□□□□ -1
SGIP1-207ENST00000468286 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
SGIP1-207ENST00000468286 DNAJA2O60884 412 aa8.8□□□□□ -1
SGIP1-207ENST00000468286 ENDOUP21128 410 aaKnown RBP8.8□□□□□ -1
SGIP1-207ENST00000468286 IGFBP6P24592 240 aaPredicted RBP8.8□□□□□ -1
SGIP1-207ENST00000468286 NBPF9Q3BBW0 867 aa8.8□□□□□ -1
SGIP1-207ENST00000468286 TMC3Q7Z5M5 1100 aa8.8□□□□□ -1
SGIP1-207ENST00000468286 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
SGIP1-207ENST00000468286 PALD1Q9ULE6 856 aa8.8□□□□□ -1
SGIP1-207ENST00000468286 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
SGIP1-207ENST00000468286 K7ESM1 405 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 FKTNO75072 461 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 F13A1P00488 732 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 CAMK2GQ13555 558 aaPredicted RBP8.79□□□□□ -1
SGIP1-207ENST00000468286 ZPBP2Q6X784 338 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 ACSL6Q9UKU0 697 aa8.79□□□□□ -1
SGIP1-207ENST00000468286 KIR3DS1Q14943 382 aa8.78□□□□□ -1
SGIP1-207ENST00000468286 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.78□□□□□ -1
SGIP1-207ENST00000468286 GPR55Q9Y2T6 319 aaPredicted RBP8.78□□□□□ -1
SGIP1-207ENST00000468286 DCAF1Q9Y4B6 1507 aa8.78□□□□□ -1
SGIP1-207ENST00000468286 A0A1W2PQ45 241 aaPredicted RBP8.77□□□□□ -1.01
SGIP1-207ENST00000468286 A0A1W2PQY0 241 aa8.77□□□□□ -1.01
SGIP1-207ENST00000468286 UBOX5O94941 541 aa8.77□□□□□ -1.01
SGIP1-207ENST00000468286 CYP4F8P98187 520 aa8.77□□□□□ -1.01
SGIP1-207ENST00000468286 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
SGIP1-207ENST00000468286 RPTNQ6XPR3 784 aa8.77□□□□□ -1.01
SGIP1-207ENST00000468286 HMGXB3Q12766 1538 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 NUDT19A8MXV4 375 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 SIGLEC6O43699 453 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 PRAMEF1O95521 474 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 PRKCAP17252 672 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 PFKLP17858 780 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 NCKAP1LP55160 1127 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 ZNF827Q17R98 1081 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 NBPF12Q5TAG4 269 aaPredicted RBP8.76□□□□□ -1.01
SGIP1-207ENST00000468286 ERVK13-1Q9NX77 482 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 MRC2Q9UBG0 1479 aa8.76□□□□□ -1.01
SGIP1-207ENST00000468286 GRIN3BO60391 1043 aa8.75□□□□□ -1.01
SGIP1-207ENST00000468286 MAPKAPK2P49137 400 aa8.75□□□□□ -1.01
SGIP1-207ENST00000468286 PLEKHN1Q494U1 663 aaPredicted RBP8.75□□□□□ -1.01
SGIP1-207ENST00000468286 UBXN11Q5T124 520 aa8.75□□□□□ -1.01
SGIP1-207ENST00000468286 DUSP9Q99956 384 aaKnown RBP8.75□□□□□ -1.01
SGIP1-207ENST00000468286 PF4P02776 101 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
SGIP1-207ENST00000468286 MAGEA10P43363 369 aaPredicted RBP8.74□□□□□ -1.01
SGIP1-207ENST00000468286 RAD51AP2Q09MP3 1159 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 NR1I3Q14994 352 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 VWA3BQ502W6 1294 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 EAF1Q96JC9 268 aaPredicted RBP8.74□□□□□ -1.01
SGIP1-207ENST00000468286 RHOVQ96L33 236 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
SGIP1-207ENST00000468286 AKAP8O43823 692 aaKnown RBP8.73□□□□□ -1.01
SGIP1-207ENST00000468286 TNFRSF1AP19438 455 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms