RNA–Protein interactions for RNA: ENST00000467439.1

RPSAP39-201, Transcript of ribosomal protein SA pseudogene 39, humanhuman

BASIC

Gene RPSAP39, Length 883 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP39-201ENST00000467439 PF4P02776 101 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 PLEKHG4Q58EX7 1191 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 ZNF697Q5TEC3 545 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 PCNX4Q63HM2 1172 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 DLK2Q6UY11 383 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 DTHD1Q6ZMT9 781 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 PRICKLE2Q7Z3G6 844 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 CTU1Q7Z7A3 348 aaKnown RBP7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 FILIP1Q7Z7B0 1213 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 SP8Q8IXZ3 490 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 ZNF34Q8IZ26 560 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 ABCB6Q9NP58 842 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 TLR6Q9Y2C9 796 aa7.57□□□□□ -1.2
RPSAP39-201ENST00000467439 TAF1P21675 1872 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 LRRC37AA6NMS7 1700 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 DDX60Q8IY21 1712 aaKnown RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 DUOX1Q9NRD9 1551 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 YDJCA8MPS7 323 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 LIG3P49916 1009 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 TBC1D10BQ4KMP7 808 aaPredicted RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 DPF2Q92785 391 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 DCPSQ96C86 337 aaKnown RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 TCF12Q99081 682 aa7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 UTP14AQ9BVJ6 771 aaKnown RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 METTL14Q9HCE5 456 aaKnown RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 R3HCC1Q9Y3T6 440 aaKnown RBP7.56□□□□□ -1.2
RPSAP39-201ENST00000467439 A0A1B0GTH6 734 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 ADM5C9JUS6 153 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 CHMP4BP1P59074 171 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 APOBRQ0VD83 1088 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 SLC10A5Q5PT55 438 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 SNAP47Q5SQN1 464 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 ZNF598Q86UK7 904 aaKnown RBP7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 GOLM1Q8NBJ4 401 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 GCC1Q96CN9 775 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 SHDQ96IW2 340 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 PCDH12Q9NPG4 1184 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
RPSAP39-201ENST00000467439 TTC24A2A3L6 582 aaPredicted RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 PSMD14O00487 310 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 SMAD7O15105 426 aaKnown RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 DNAJC6O75061 913 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 SASH3O75995 380 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 CELA3AP09093 270 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 RPS12P25398 132 aaKnown RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 CRKP46108 304 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 EIF4A1P60842 406 aaKnown RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 LMNB2Q03252 620 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 GRAPQ13588 217 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 PKN2Q16513 984 aaKnown RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 OR13H1Q8NG92 308 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 GRAPLQ8TC17 118 aaPredicted RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 NKD1Q969G9 470 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 ZCCHC2Q9C0B9 1178 aaKnown RBP7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 KANSL2Q9H9L4 492 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 BRD7Q9NPI1 651 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 KLHL42Q9P2K6 505 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 HDAC9Q9UKV0 1011 aa7.54□□□□□ -1.2
RPSAP39-201ENST00000467439 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 NEFMP07197 916 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 KIF4BQ2VIQ3 1234 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 CCDC81Q6ZN84 652 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 RASAL3Q86YV0 1011 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 CCNJLQ8IV13 435 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 SLITRK4Q8IW52 837 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 LILRB2Q8N423 598 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 CELF2-AS1Q8N7Q2 184 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 SH3TC2Q8TF17 1288 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 CEP44Q9C0F1 390 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 CCDC113Q9H0I3 377 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 DBNDD1Q9H9R9 158 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 FANCLQ9NW38 375 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 GGA3Q9NZ52 723 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 PAPPA2Q9BXP8 1791 aa7.53□□□□□ -1.2
RPSAP39-201ENST00000467439 SCN9AQ15858 1988 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 PHF20L1A8MW92 1017 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 MMP20O60882 483 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 CDC45O75419 566 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 RHOQP17081 205 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 SMPD1P17405 629 aa7.52□□□□□ -1.21
RPSAP39-201ENST00000467439 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms