RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TOX2Q96NM4 488 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 HAUS7Q99871 368 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 TSEN34Q9BSV6 310 aaKnown RBP18.84■□□□□ 0.61
TSSC4-208ENST00000467308 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 GREB1LQ9C091 1923 aaPredicted RBP18.83■□□□□ 0.6
TSSC4-208ENST00000467308 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 SMIM22K7EJ46 135 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 RAG1P15918 1043 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 TAL1P17542 331 aaPredicted RBP18.83■□□□□ 0.6
TSSC4-208ENST00000467308 SLFNL1Q499Z3 407 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 ANKRD33Q7Z3H0 272 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
TSSC4-208ENST00000467308 TTC28Q96AY4 2481 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 PQBP1O60828 265 aaKnown RBP18.82■□□□□ 0.6
TSSC4-208ENST00000467308 FOSL2P15408 326 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 EPHB4P54760 987 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 FPGSQ05932 587 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 FAM83BQ5T0W9 1011 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 NUP133Q8WUM0 1156 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
TSSC4-208ENST00000467308 SYNGAP1Q96PV0 1343 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 MOXD2PA6NHM9 499 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 ACLYP53396 1101 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 TEX13BQ9BXU2 312 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
TSSC4-208ENST00000467308 SLC4A4Q9Y6R1 1079 aa18.81■□□□□ 0.6
TSSC4-208ENST00000467308 DCDC2CA8MYV0 355 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 FAAP100Q0VG06 881 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 MAMDC4Q6UXC1 1216 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 KLHDC9Q8NEP7 349 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
TSSC4-208ENST00000467308 STARD7Q9NQZ5 370 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 FAM184BQ9ULE4 1060 aa18.8■□□□□ 0.6
TSSC4-208ENST00000467308 SYNRGQ9UMZ2 1314 aa18.79■□□□□ 0.6
TSSC4-208ENST00000467308 DNAJC25-GNG10A0A024R161 153 aa18.79■□□□□ 0.6
TSSC4-208ENST00000467308 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.79■□□□□ 0.6
TSSC4-208ENST00000467308 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.79■□□□□ 0.6
TSSC4-208ENST00000467308 ATP2A1O14983 1001 aa18.79■□□□□ 0.6
TSSC4-208ENST00000467308 RAD21O60216 631 aa18.79■□□□□ 0.6
TSSC4-208ENST00000467308 CCSAPQ6IQ19 270 aaPredicted RBP18.79■□□□□ 0.6
TSSC4-208ENST00000467308 ZNF467Q7Z7K2 595 aaPredicted RBP18.79■□□□□ 0.6
TSSC4-208ENST00000467308 LENG1Q96BZ8 264 aaPredicted RBP18.79■□□□□ 0.6
TSSC4-208ENST00000467308 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
TSSC4-208ENST00000467308 MROH7Q68CQ1 1323 aa18.78■□□□□ 0.6
TSSC4-208ENST00000467308 DUSP11O75319 330 aaKnown RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 SNAI1O95863 264 aaPredicted RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 CHGBP05060 677 aa18.78■□□□□ 0.6
TSSC4-208ENST00000467308 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 SNRNP48Q6IEG0 339 aaKnown RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 PRPF38AQ8NAV1 312 aaKnown RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 SYMPKQ92797 1274 aaKnown RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 DDX11Q96FC9 970 aa18.78■□□□□ 0.6
TSSC4-208ENST00000467308 PUS7LQ9H0K6 701 aaKnown RBP18.78■□□□□ 0.6
TSSC4-208ENST00000467308 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
TSSC4-208ENST00000467308 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
TSSC4-208ENST00000467308 ELP1O95163 1332 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 TIMP1P01033 207 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 DNAJB2P25686 324 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 KCNA10Q16322 511 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 SBK1Q52WX2 424 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 TBX21Q9UL17 535 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 RIPK3Q9Y572 518 aa18.77■□□□□ 0.6
TSSC4-208ENST00000467308 MCM3APO60318 1980 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 F5H6K3 240 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 NDUFB10O96000 172 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 RASA1P20936 1047 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 KLRC3Q07444 240 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 GIMAP6Q6P9H5 292 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 PCSK9Q8NBP7 692 aaKnown RBP18.76■□□□□ 0.59
TSSC4-208ENST00000467308 GLT1D1Q96MS3 346 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 STRBPQ96SI9 672 aaKnown RBP18.76■□□□□ 0.59
TSSC4-208ENST00000467308 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
TSSC4-208ENST00000467308 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
TSSC4-208ENST00000467308 NUCB1Q02818 461 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 ZNF576Q9H609 170 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 PRDM6Q9NQX0 595 aa18.75■□□□□ 0.59
TSSC4-208ENST00000467308 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
TSSC4-208ENST00000467308 MYO9BQ13459 2157 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 ZBED4O75132 1171 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 CDK7P50613 346 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 ACVR2BQ13705 512 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 TIFAQ96CG3 184 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSSC4-208ENST00000467308 UPF3AQ9H1J1 476 aaKnown RBP18.74■□□□□ 0.59
TSSC4-208ENST00000467308 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 FBXO40Q9UH90 709 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 SYNPO2Q9UMS6 1093 aa18.74■□□□□ 0.59
TSSC4-208ENST00000467308 MYADML2A6NDP7 307 aa18.73■□□□□ 0.59
TSSC4-208ENST00000467308 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms