RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 USP5P45974 858 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 PPP4CP60510 307 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 KARSQ15046 597 aaKnown RBP16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 GRIK5Q16478 980 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 MCM9Q9NXL9 1143 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
PRPF38B-204ENST00000467302 C6orf229H3BNL8 230 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 SRGNP10124 158 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 CYP2D6P10635 497 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 FECHP22830 423 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 TROAPQ12815 778 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 CTAGE1Q96RT6 745 aa16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 IRX2Q9BZI1 471 aaPredicted RBP16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
PRPF38B-204ENST00000467302 MMP10P09238 476 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 CYP2C19P33261 490 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 STX17P56962 302 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 DIXDC1Q155Q3 683 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 KLHL10Q6JEL2 608 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 PPFIBP1Q86W92 1011 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 SH3RF3Q8TEJ3 882 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 PARD6BQ9BYG5 372 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 MYH6P13533 1939 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 hCG_1642624A0A1W2PR95 340 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 MFAP3LO75121 409 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 ATP2C1P98194 919 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 EVX2Q03828 476 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 TEX35Q5T0J7 233 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 RASGRP2Q7LDG7 609 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
PRPF38B-204ENST00000467302 CDK5RAP2Q96SN8 1893 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 ITIH6Q6UXX5 1313 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 FAM205AQ6ZU69 1335 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 QSER1Q2KHR3 1735 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 CALM1P0DP23 149 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 CALM2P0DP24 149 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 CALM3P0DP25 149 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 E2F4Q16254 413 aa16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 MKRN1Q9UHC7 482 aaKnown RBP16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 DDX60LQ5H9U9 1706 aaKnown RBP16.66■□□□□ 0.26
PRPF38B-204ENST00000467302 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 LRRC10BA6NIK2 292 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 GYPCP04921 128 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 TXLNAP40222 546 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 ZNF174Q15697 407 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 TTC38Q5R3I4 469 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 C12orf60Q5U649 245 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 SLF2Q8IX21 1173 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 ATRIPQ8WXE1 791 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 COA1Q9GZY4 146 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 ARFGAP3Q9NP61 516 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 LZTFL1Q9NQ48 299 aa16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.65■□□□□ 0.26
PRPF38B-204ENST00000467302 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 DDAH1O94760 285 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 CASP14P31944 242 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 PTGDRQ13258 359 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 MFSD14BQ5SR56 506 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 JAKMIP3Q5VZ66 844 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 SRGAP1Q7Z6B7 1085 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 CPLX3Q8WVH0 158 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 FUT8Q9BYC5 575 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 LIMA1Q9UHB6 759 aaKnown RBP16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
PRPF38B-204ENST00000467302 KIF5CO60282 957 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 PLCG2P16885 1265 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 MTRQ99707 1265 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 GPR75-ASB3A0A0A6YYF3 556 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 NMT2O60551 498 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 BTDP43251 543 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 CHMP4BP1P59074 171 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms