RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZMYM5Q9UJ78 669 aa7.08□□□□□ -1.28
SMC4-207ENST00000467263 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
SMC4-207ENST00000467263 CRKP46108 304 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 CEBPAP49715 358 aaPredicted RBP7.07□□□□□ -1.28
SMC4-207ENST00000467263 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
SMC4-207ENST00000467263 SRSF3P84103 164 aaKnown RBP7.07□□□□□ -1.28
SMC4-207ENST00000467263 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 NBPF12Q5TAG4 269 aaPredicted RBP7.07□□□□□ -1.28
SMC4-207ENST00000467263 CEP128Q6ZU80 1094 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 ZNF512BQ96KM6 892 aaPredicted RBP7.07□□□□□ -1.28
SMC4-207ENST00000467263 CNTD2Q9H8S5 307 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 TCFL5Q9UL49 500 aa7.07□□□□□ -1.28
SMC4-207ENST00000467263 NRDCO43847 1150 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 GREM1O60565 184 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 VIPR1P32241 457 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 VMACQ2NL98 169 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 ZNF385BQ569K4 471 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 TCERG1LQ5VWI1 586 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 DAGLBQ8NCG7 672 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 PCDHB14Q9Y5E9 798 aa7.06□□□□□ -1.28
SMC4-207ENST00000467263 FOXD2O60548 495 aaPredicted RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 PRAMEF1O95521 474 aa7.05□□□□□ -1.28
SMC4-207ENST00000467263 SYPP08247 313 aa7.05□□□□□ -1.28
SMC4-207ENST00000467263 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 HDLBPQ00341 1268 aaKnown RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 OVOS1Q6IE37 1185 aa7.05□□□□□ -1.28
SMC4-207ENST00000467263 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 ENOX1Q8TC92 643 aaKnown RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
SMC4-207ENST00000467263 SPON2Q9BUD6 331 aa7.05□□□□□ -1.28
SMC4-207ENST00000467263 PRDM14Q9GZV8 571 aa7.05□□□□□ -1.28
SMC4-207ENST00000467263 RAG1P15918 1043 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 SLC14A2Q15849 920 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 CWF19L2Q2TBE0 894 aaKnown RBP7.04□□□□□ -1.28
SMC4-207ENST00000467263 SEZ6Q53EL9 994 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 ZNF655Q8N720 491 aaPredicted RBP7.04□□□□□ -1.28
SMC4-207ENST00000467263 LINC00116Q8NCU8 138 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
SMC4-207ENST00000467263 XYLT2Q9H1B5 865 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 ASCC2Q9H1I8 757 aaPredicted RBP7.04□□□□□ -1.28
SMC4-207ENST00000467263 ANTXR1Q9H6X2 564 aa7.04□□□□□ -1.28
SMC4-207ENST00000467263 DDX41Q9UJV9 622 aaKnown RBP7.04□□□□□ -1.28
SMC4-207ENST00000467263 KIR2DL1P43626 348 aaPredicted RBP7.03□□□□□ -1.28
SMC4-207ENST00000467263 KIR2DL2P43627 348 aaPredicted RBP7.03□□□□□ -1.28
SMC4-207ENST00000467263 CDR1P51861 262 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 PCBP3P57721 371 aaKnown RBP7.03□□□□□ -1.28
SMC4-207ENST00000467263 APOBRQ0VD83 1088 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 NT5DC4Q86YG4 428 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 SIGLEC10Q96LC7 697 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 LRRC3Q9BY71 257 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 CRTAC1Q9NQ79 661 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 IRAK3Q9Y616 596 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 ROBO2Q9HCK4 1378 aa7.03□□□□□ -1.28
SMC4-207ENST00000467263 OTOL1A6NHN0 477 aaPredicted RBP7.02□□□□□ -1.29
SMC4-207ENST00000467263 MEIS1O00470 390 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 MCM4P33991 863 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 RTP1P59025 263 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 YBX1P67809 324 aaKnown RBP7.02□□□□□ -1.29
SMC4-207ENST00000467263 FEZF2Q8TBJ5 459 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 NT5C1AQ9BXI3 368 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 SIRT5Q9NXA8 310 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 GMIPQ9P107 970 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 KLHL14Q9P2G3 628 aa7.02□□□□□ -1.29
SMC4-207ENST00000467263 GPR55Q9Y2T6 319 aaPredicted RBP7.02□□□□□ -1.29
SMC4-207ENST00000467263 FADS2P1A8MWK0 482 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 RFXAPO00287 272 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 IRS4O14654 1257 aaPredicted RBP7.01□□□□□ -1.29
SMC4-207ENST00000467263 N4BP3O15049 544 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 SIGLEC6O43699 453 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 ATE1O95260 518 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 PNLIPP16233 465 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 CTSKP43235 329 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 RNF4P78317 190 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 CLCQ05315 142 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 HSF5Q4G112 596 aaPredicted RBP7.01□□□□□ -1.29
SMC4-207ENST00000467263 GK5Q6ZS86 529 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 TMEM192Q8IY95 271 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 NKD1Q969G9 470 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 ATG4CQ96DT6 458 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 CNNM2Q9H8M5 875 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 JAG2Q9Y219 1238 aa7.01□□□□□ -1.29
SMC4-207ENST00000467263 SSU72P8A0A1W2PR75 194 aa7□□□□□ -1.29
SMC4-207ENST00000467263 AFF3P51826 1226 aaKnown RBP7□□□□□ -1.29
SMC4-207ENST00000467263 CHMP4BP1P59074 171 aa7□□□□□ -1.29
SMC4-207ENST00000467263 ERVFRD-1P60508 538 aa7□□□□□ -1.29
SMC4-207ENST00000467263 CDCP2Q5VXM1 449 aa7□□□□□ -1.29
SMC4-207ENST00000467263 IGDCC3Q8IVU1 814 aa7□□□□□ -1.29
SMC4-207ENST00000467263 ZNF654Q8IZM8 581 aa7□□□□□ -1.29
SMC4-207ENST00000467263 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7□□□□□ -1.29
SMC4-207ENST00000467263 HRKO00198 91 aa6.99□□□□□ -1.29
SMC4-207ENST00000467263 NCKAP1LP55160 1127 aa6.99□□□□□ -1.29
SMC4-207ENST00000467263 MLECQ14165 292 aa6.99□□□□□ -1.29
SMC4-207ENST00000467263 NFIXQ14938 502 aa6.99□□□□□ -1.29
SMC4-207ENST00000467263 SLITRK4Q8IW52 837 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms