RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 BLZF1Q9H2G9 400 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 AKR1B1P15121 316 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 NOVP48745 357 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
HPS1-208ENST00000467246 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 G3V3G9 751 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 CDK11BP21127 795 aaKnown RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 NAPAP54920 295 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 PDXDC2PQ6P474 469 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 PIGSQ96S52 555 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 MTMR4Q9NYA4 1195 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
HPS1-208ENST00000467246 MYO1BO43795 1136 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 STX17P56962 302 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 CCAR2Q8N163 923 aaKnown RBP12.97□□□□□ -0.33
HPS1-208ENST00000467246 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
HPS1-208ENST00000467246 GSDMAQ96QA5 445 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 SMCO2A6NFE2 343 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 PP2D1A8MPX8 630 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 ERCC5P28715 1186 aaPredicted RBP12.97□□□□□ -0.33
HPS1-208ENST00000467246 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
HPS1-208ENST00000467246 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
HPS1-208ENST00000467246 PDHBP11177 359 aa12.96□□□□□ -0.33
HPS1-208ENST00000467246 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
HPS1-208ENST00000467246 LONP1P36776 959 aaKnown RBP12.96□□□□□ -0.33
HPS1-208ENST00000467246 NFIAQ12857 509 aa12.96□□□□□ -0.33
HPS1-208ENST00000467246 CUL4BQ13620 913 aa12.96□□□□□ -0.33
HPS1-208ENST00000467246 KARSQ15046 597 aaKnown RBP12.96□□□□□ -0.33
HPS1-208ENST00000467246 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
HPS1-208ENST00000467246 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.33
HPS1-208ENST00000467246 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
HPS1-208ENST00000467246 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.34
HPS1-208ENST00000467246 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.34
HPS1-208ENST00000467246 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.34
HPS1-208ENST00000467246 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.34
HPS1-208ENST00000467246 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.34
HPS1-208ENST00000467246 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.34
HPS1-208ENST00000467246 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.34
HPS1-208ENST00000467246 PCDHAC2Q9Y5I4 1007 aa12.96□□□□□ -0.34
HPS1-208ENST00000467246 NRXN2Q9P2S2 1712 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 ZFPM1Q8IX07 1006 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 COBLO75128 1261 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
HPS1-208ENST00000467246 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
HPS1-208ENST00000467246 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 IGKV6D-41A0A0C4DH26 115 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 SHMT1P34896 483 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 CACNB3P54284 484 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 FOCADQ5VW36 1801 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 STAT6P42226 847 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 SPATA1Q5VX52 437 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
HPS1-208ENST00000467246 PLIN2Q99541 437 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 KCND1Q9NSA2 647 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
HPS1-208ENST00000467246 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
HPS1-208ENST00000467246 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
HPS1-208ENST00000467246 GNA11P29992 359 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 TXLNAP40222 546 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 CRKP46108 304 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
HPS1-208ENST00000467246 SOGA3Q5TF21 947 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 COA7Q96BR5 231 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms