RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ASB16Q96NS5 453 aa7.65□□□□□ -1.18
XRN1-206ENST00000467077 REV1Q9UBZ9 1251 aa7.65□□□□□ -1.18
XRN1-206ENST00000467077 TNFRSF1AP19438 455 aa7.64□□□□□ -1.19
XRN1-206ENST00000467077 ENDOUP21128 410 aaKnown RBP7.64□□□□□ -1.19
XRN1-206ENST00000467077 CYP4F8P98187 520 aa7.64□□□□□ -1.19
XRN1-206ENST00000467077 NT5DC1Q5TFE4 455 aa7.64□□□□□ -1.19
XRN1-206ENST00000467077 PRKCAP17252 672 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 BBS9Q3SYG4 887 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 ZC3H14Q6PJT7 736 aaKnown RBP7.63□□□□□ -1.19
XRN1-206ENST00000467077 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 NUP43Q8NFH3 380 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 EAF1Q96JC9 268 aaPredicted RBP7.63□□□□□ -1.19
XRN1-206ENST00000467077 TNFRSF12AQ9NP84 129 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
XRN1-206ENST00000467077 TLR6Q9Y2C9 796 aa7.63□□□□□ -1.19
XRN1-206ENST00000467077 FADS2P1A8MWK0 482 aa7.62□□□□□ -1.19
XRN1-206ENST00000467077 CHURC1-FNTBB4DL54 471 aa7.62□□□□□ -1.19
XRN1-206ENST00000467077 PLEKHN1Q494U1 663 aaPredicted RBP7.62□□□□□ -1.19
XRN1-206ENST00000467077 ZPBP2Q6X784 338 aa7.62□□□□□ -1.19
XRN1-206ENST00000467077 CCDC84Q86UT8 332 aaPredicted RBP7.62□□□□□ -1.19
XRN1-206ENST00000467077 LSRQ86X29 649 aaPredicted RBP7.62□□□□□ -1.19
XRN1-206ENST00000467077 KIF2CQ99661 725 aa7.62□□□□□ -1.19
XRN1-206ENST00000467077 SMPD4Q9NXE4 827 aa7.62□□□□□ -1.19
XRN1-206ENST00000467077 ADAM17P78536 824 aa7.61□□□□□ -1.19
XRN1-206ENST00000467077 ZNF200P98182 395 aaPredicted RBP7.61□□□□□ -1.19
XRN1-206ENST00000467077 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
XRN1-206ENST00000467077 TARBP2Q15633 366 aaKnown RBP7.61□□□□□ -1.19
XRN1-206ENST00000467077 RPTNQ6XPR3 784 aa7.61□□□□□ -1.19
XRN1-206ENST00000467077 TMC3Q7Z5M5 1100 aa7.61□□□□□ -1.19
XRN1-206ENST00000467077 SUSD2Q9UGT4 822 aa7.61□□□□□ -1.19
XRN1-206ENST00000467077 P4HBP07237 508 aaKnown RBP7.6□□□□□ -1.19
XRN1-206ENST00000467077 MSL3P1P0C860 447 aa7.6□□□□□ -1.19
XRN1-206ENST00000467077 NR1I3Q14994 352 aa7.6□□□□□ -1.19
XRN1-206ENST00000467077 LIPIQ6XZB0 460 aa7.6□□□□□ -1.19
XRN1-206ENST00000467077 SPATA25Q9BR10 227 aa7.6□□□□□ -1.19
XRN1-206ENST00000467077 MATN3O15232 486 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 HTR3BO95264 441 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 IGFBP6P24592 240 aaPredicted RBP7.59□□□□□ -1.19
XRN1-206ENST00000467077 MAPKAPK2P49137 400 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 MLECQ14165 292 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 BNC2Q6ZN30 1099 aaPredicted RBP7.59□□□□□ -1.19
XRN1-206ENST00000467077 FAN1Q9Y2M0 1017 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
XRN1-206ENST00000467077 PRR36Q9H6K5 1346 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQ27 194 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQ45 241 aaPredicted RBP7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQ64 194 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQC6 194 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQD8 194 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQY0 241 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 PRAMEF1O95521 474 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 FSHBP01225 129 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 CNR2P34972 360 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
XRN1-206ENST00000467077 SLC16A11Q8NCK7 471 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 PHC3Q8NDX5 983 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 GATAD2BQ8WXI9 593 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 CDADC1Q9BWV3 514 aa7.58□□□□□ -1.2
XRN1-206ENST00000467077 IRS2Q9Y4H2 1338 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 OVOL3O00110 214 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 RGS13O14921 159 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 VWA3BQ502W6 1294 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 SLCO6A1Q86UG4 719 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 NOC4LQ9BVI4 516 aaKnown RBP7.57□□□□□ -1.2
XRN1-206ENST00000467077 ERVK13-1Q9NX77 482 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
XRN1-206ENST00000467077 A0A1B0GTL3 188 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 SIGLEC6O43699 453 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 RAG1P15918 1043 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 GJA9P57773 515 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 NBPF9Q3BBW0 867 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 FNIP1Q8TF40 1166 aa7.56□□□□□ -1.2
XRN1-206ENST00000467077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.56□□□□□ -1.2
XRN1-206ENST00000467077 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
XRN1-206ENST00000467077 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
XRN1-206ENST00000467077 AEBP1Q8IUX7 1158 aa7.55□□□□□ -1.2
XRN1-206ENST00000467077 ADGRG2Q8IZP9 1017 aa7.55□□□□□ -1.2
XRN1-206ENST00000467077 FAM221AA4D161 298 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 ITGB3P05106 788 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 HMGA2P52926 109 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 CPZQ66K79 652 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 DDX1Q92499 740 aaKnown RBP7.54□□□□□ -1.2
XRN1-206ENST00000467077 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
XRN1-206ENST00000467077 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 DNAJA2O60884 412 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 F13A1P00488 732 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
XRN1-206ENST00000467077 FOXO4P98177 505 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 LMNB2Q03252 620 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 RAD51AP2Q09MP3 1159 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
XRN1-206ENST00000467077 SAPCD2Q86UD0 394 aa7.53□□□□□ -1.2
XRN1-206ENST00000467077 POLR3KQ9Y2Y1 108 aaPredicted RBP7.53□□□□□ -1.2
XRN1-206ENST00000467077 SH3D21A4FU49 640 aa7.52□□□□□ -1.21
XRN1-206ENST00000467077 UBOX5O94941 541 aa7.52□□□□□ -1.21
XRN1-206ENST00000467077 NBPF12Q5TAG4 269 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms