RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CHMP4BP1P59074 171 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 PPP1R13LQ8WUF5 828 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 ASPNQ9BXN1 380 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
LRCH3-212ENST00000466845 REV1Q9UBZ9 1251 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 CTNND2Q9UQB3 1225 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
LRCH3-212ENST00000466845 NOP58Q9Y2X3 529 aaKnown RBP7.1□□□□□ -1.27
LRCH3-212ENST00000466845 CORINQ9Y5Q5 1042 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 TCERG1O14776 1098 aaKnown RBP7.09□□□□□ -1.27
LRCH3-212ENST00000466845 ATE1O95260 518 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 OGFOD2Q6N063 350 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 ATL2Q8NHH9 583 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-212ENST00000466845 IRF2BPLQ9H1B7 796 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 ZSWIM5Q9P217 1185 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 GGT7Q9UJ14 662 aa7.09□□□□□ -1.27
LRCH3-212ENST00000466845 URB2Q14146 1524 aaKnown RBP7.08□□□□□ -1.28
LRCH3-212ENST00000466845 TLDC2A0PJX2 215 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 TNNI2P48788 182 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 FAM160A1Q05DH4 1040 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 CCDC184Q52MB2 194 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 FBXL19Q6PCT2 694 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 ANKRD23Q86SG2 305 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 ZSWIM9Q86XI8 627 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 CCDC146Q8IYE0 955 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 REXO1Q8N1G1 1221 aaKnown RBP7.08□□□□□ -1.28
LRCH3-212ENST00000466845 SNRNP27Q8WVK2 155 aaKnown RBP7.08□□□□□ -1.28
LRCH3-212ENST00000466845 SCYL1Q96KG9 808 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 ALPK1Q96QP1 1244 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-212ENST00000466845 CARMIL2Q6F5E8 1435 aa7.08□□□□□ -1.28
LRCH3-212ENST00000466845 UPK3BL1B0FP48 263 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 UPK3BL2E5RIL1 263 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 SRFP11831 508 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 CCNFP41002 786 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 EVA1CP58658 441 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 RAD51AP2Q09MP3 1159 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 MTA1Q13330 715 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 KCNMB1Q16558 191 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 LRRFIP1Q32MZ4 808 aaKnown RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 HSP90AB3PQ58FF7 597 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 BHLHE22Q8NFJ8 381 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 ENOX1Q8TC92 643 aaKnown RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 SYTL4Q96C24 671 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 LNPKQ9C0E8 428 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 EHMT1Q9H9B1 1298 aa7.07□□□□□ -1.28
LRCH3-212ENST00000466845 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
LRCH3-212ENST00000466845 F6X3S4 739 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 RGS13O14921 159 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 RAC2P15153 192 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 GBP1P32455 592 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 RNF4P78317 190 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 ICE2Q659A1 982 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 SDE2Q6IQ49 451 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 PHACTR4Q8IZ21 702 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 Q96M66 194 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 NT5C1AQ9BXI3 368 aa7.06□□□□□ -1.28
LRCH3-212ENST00000466845 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.06□□□□□ -1.28
LRCH3-212ENST00000466845 DUSP15Q9H1R2 295 aaPredicted RBP7.06□□□□□ -1.28
LRCH3-212ENST00000466845 CCDC189A1A4V9 331 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 CHURC1-FNTBB4DL54 471 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 GLI1P08151 1106 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 TPP2P29144 1249 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 ZNF165P49910 485 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 GAB4Q2WGN9 574 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 TSPYL5Q86VY4 417 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 TMEM87AQ8NBN3 555 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 KREMEN1Q96MU8 473 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 TMX4Q9H1E5 349 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 ASCC2Q9H1I8 757 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 PRDM7Q9NQW5 492 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 TMEM51Q9NW97 253 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 GMIPQ9P107 970 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 KLHL3Q9UH77 587 aa7.05□□□□□ -1.28
LRCH3-212ENST00000466845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-212ENST00000466845 ABCC8Q09428 1581 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 GRIN3BO60391 1043 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 ESR1P03372 595 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 FAM200BP0CF97 657 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 POU5F1Q01860 360 aaKnown RBP7.04□□□□□ -1.28
LRCH3-212ENST00000466845 HSP90AA2PQ14568 343 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-212ENST00000466845 TMEM67Q5HYA8 995 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 CDCP2Q5VXM1 449 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 NBPF5PQ86XG9 351 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-212ENST00000466845 KRTAP19-1Q8IUB9 90 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 ZCRB1Q8TBF4 217 aaKnown RBP7.04□□□□□ -1.28
LRCH3-212ENST00000466845 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 SLC38A3Q99624 504 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 BRMS1Q9HCU9 246 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 COPRSQ9NQ92 184 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms