RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CPA1P15085 419 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 PSMA5P28066 241 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 SLC16A2P36021 539 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 CCNA1P78396 465 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 DHX32Q7L7V1 743 aaKnown RBP16.25■□□□□ 0.19
UBA3-209ENST00000466763 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 IGDCC4Q8TDY8 1250 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 RLFQ13129 1914 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 VWA5AO00534 786 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 SH2B2O14492 632 aaPredicted RBP16.24■□□□□ 0.19
UBA3-209ENST00000466763 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
UBA3-209ENST00000466763 CNMDO75829 334 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
UBA3-209ENST00000466763 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
UBA3-209ENST00000466763 CTGFP29279 349 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 ZNF543Q08ER8 600 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 TMTC2Q8N394 836 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 ZSWIM8A7E2V4 1837 aa16.24■□□□□ 0.19
UBA3-209ENST00000466763 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
UBA3-209ENST00000466763 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
UBA3-209ENST00000466763 HOXD10P28358 340 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 SNAP25P60880 206 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 CAP1Q01518 475 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 TMEM132BQ14DG7 1078 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 COA7Q96BR5 231 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 MTA3Q9BTC8 594 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 SPATC1LQ9H0A9 340 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 PORCNQ9H237 461 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 LY9Q9HBG7 655 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 PRR12Q9ULL5 1215 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
UBA3-209ENST00000466763 PARP14Q460N5 1801 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
UBA3-209ENST00000466763 MGAMO43451 1857 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 COL11A1P12107 1806 aaPredicted RBP16.22■□□□□ 0.19
UBA3-209ENST00000466763 SNHG28P0DPA3 235 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 MAPK4P31152 587 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 STAT3P40763 770 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 ASPRV1Q53RT3 343 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
UBA3-209ENST00000466763 CCDC174Q6PII3 467 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
UBA3-209ENST00000466763 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
UBA3-209ENST00000466763 VAT1LQ9HCJ6 419 aa16.22■□□□□ 0.19
UBA3-209ENST00000466763 PLA2G6O60733 806 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 RPS6KB1P23443 525 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
UBA3-209ENST00000466763 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.19
UBA3-209ENST00000466763 Q6ZUG5 572 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 ZNF654Q8IZM8 581 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 MCOLN1Q9GZU1 580 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 SLC12A7Q9Y666 1083 aa16.21■□□□□ 0.19
UBA3-209ENST00000466763 WDR19Q8NEZ3 1342 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 GNRH1P01148 92 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 FDX1P10109 184 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 ERCC3P19447 782 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 RXRAP19793 462 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 LIFRP42702 1097 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 GPR142Q7Z601 462 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 CCDC144CPQ8IYA2 1237 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 CTCFLQ8NI51 663 aaPredicted RBP16.2■□□□□ 0.18
UBA3-209ENST00000466763 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 UPF3BQ9BZI7 483 aaKnown RBP16.2■□□□□ 0.18
UBA3-209ENST00000466763 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 SRRDQ9UH36 339 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 CYP46A1Q9Y6A2 500 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
UBA3-209ENST00000466763 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 SLC25A27O95847 323 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 PRKCZQ05513 592 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 GRM4Q14833 912 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
UBA3-209ENST00000466763 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 ZNF214Q9UL59 606 aaPredicted RBP16.19■□□□□ 0.18
UBA3-209ENST00000466763 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
UBA3-209ENST00000466763 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms