RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SNHG28P0DPA3 235 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 PDHBP11177 359 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 STAT2P52630 851 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 SEC23AQ15436 765 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 FAM160B2Q86V87 743 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 NCAPG2Q86XI2 1143 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 NCOA7Q8NI08 942 aa30.45■■■□□ 2.47
SMC4-206ENST00000465903 CWC22Q9HCG8 908 aaKnown RBP30.45■■■□□ 2.47
SMC4-206ENST00000465903 SLC15A5A6NIM6 579 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 ZBED4O75132 1171 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 MAP2K5Q13163 448 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 GRB14Q14449 540 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 MTFR1Q15390 333 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 CREB3L3Q68CJ9 461 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 TTBK2Q6IQ55 1244 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 MROH8Q9H579 483 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 ISY1Q9ULR0 285 aaKnown RBP30.44■■■□□ 2.46
SMC4-206ENST00000465903 ZNF236Q9UL36 1845 aa30.44■■■□□ 2.46
SMC4-206ENST00000465903 ATP2A1O14983 1001 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 SLC25A27O95847 323 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 XRCC5P13010 732 aaKnown RBP30.43■■■□□ 2.46
SMC4-206ENST00000465903 BTNL9Q6UXG8 535 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 MB21D2Q8IYB1 491 aaPredicted RBP30.43■■■□□ 2.46
SMC4-206ENST00000465903 UBAC1Q9BSL1 405 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 RIPK3Q9Y572 518 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 IVNS1ABPQ9Y6Y0 642 aa30.43■■■□□ 2.46
SMC4-206ENST00000465903 STRNO43815 780 aa30.42■■■□□ 2.46
SMC4-206ENST00000465903 MYCP01106 439 aaPredicted RBP30.42■■■□□ 2.46
SMC4-206ENST00000465903 RGS2P41220 211 aa30.42■■■□□ 2.46
SMC4-206ENST00000465903 CCDC96Q2M329 555 aa30.42■■■□□ 2.46
SMC4-206ENST00000465903 PNMA1Q8ND90 353 aa30.42■■■□□ 2.46
SMC4-206ENST00000465903 RAVER2Q9HCJ3 691 aaKnown RBP30.42■■■□□ 2.46
SMC4-206ENST00000465903 PRR12Q9ULL5 1215 aa30.42■■■□□ 2.46
SMC4-206ENST00000465903 FRMPD2Q68DX3 1309 aaPredicted RBP30.42■■■□□ 2.46
SMC4-206ENST00000465903 FDX1P10109 184 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 RGS19P49795 217 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 ANTXR2P58335 489 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 ZNF543Q08ER8 600 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 CPXCR1Q8N123 301 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 TRIB2Q92519 343 aa30.41■■■□□ 2.46
SMC4-206ENST00000465903 BIN2Q9UBW5 565 aaPredicted RBP30.41■■■□□ 2.46
SMC4-206ENST00000465903 PLXNA1Q9UIW2 1896 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 POTEFA5A3E0 1075 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 INHAP05111 366 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 SLC16A2P36021 539 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 IKQ13123 557 aaPredicted RBP30.4■■■□□ 2.46
SMC4-206ENST00000465903 CCL14Q16627 93 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 SNRNP48Q6IEG0 339 aaKnown RBP30.4■■■□□ 2.46
SMC4-206ENST00000465903 CHST3Q7LGC8 479 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 RALYLQ86SE5 291 aaKnown RBP30.4■■■□□ 2.46
SMC4-206ENST00000465903 NPLOC4Q8TAT6 608 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 TEX13BQ9BXU2 312 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 KAT14Q9H8E8 782 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 GPCPD1Q9NPB8 672 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 ZNF536O15090 1300 aa30.4■■■□□ 2.46
SMC4-206ENST00000465903 HOXC6P09630 235 aa30.39■■■□□ 2.46
SMC4-206ENST00000465903 OAZ1P54368 228 aa30.39■■■□□ 2.46
SMC4-206ENST00000465903 UBXN2AP68543 259 aa30.39■■■□□ 2.46
SMC4-206ENST00000465903 TRIM32Q13049 653 aa30.39■■■□□ 2.46
SMC4-206ENST00000465903 COL9A3Q14050 684 aaPredicted RBP30.39■■■□□ 2.46
SMC4-206ENST00000465903 ADORA2AP29274 412 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 SNAP25P60880 206 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 IFIT1BQ5T764 474 aaKnown RBP30.38■■■□□ 2.45
SMC4-206ENST00000465903 ABRAQ8N0Z2 381 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 APBA2Q99767 749 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 TMEM106CQ9BVX2 250 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 SENP2Q9HC62 589 aa30.38■■■□□ 2.45
SMC4-206ENST00000465903 CTDP1Q9Y5B0 961 aaPredicted RBP30.38■■■□□ 2.45
SMC4-206ENST00000465903 COBLO75128 1261 aa30.37■■■□□ 2.45
SMC4-206ENST00000465903 HMGCRP04035 888 aa30.37■■■□□ 2.45
SMC4-206ENST00000465903 COPB2P35606 906 aa30.37■■■□□ 2.45
SMC4-206ENST00000465903 SYDE2Q5VT97 1194 aa30.37■■■□□ 2.45
SMC4-206ENST00000465903 FLRT1Q9NZU1 646 aa30.37■■■□□ 2.45
SMC4-206ENST00000465903 IFIT3O14879 490 aaKnown RBP30.36■■■□□ 2.45
SMC4-206ENST00000465903 GOLGA8HP0CJ92 632 aa30.36■■■□□ 2.45
SMC4-206ENST00000465903 CCL5P13501 91 aa30.36■■■□□ 2.45
SMC4-206ENST00000465903 IGDCC4Q8TDY8 1250 aa30.36■■■□□ 2.45
SMC4-206ENST00000465903 UNC93B1Q9H1C4 597 aa30.36■■■□□ 2.45
SMC4-206ENST00000465903 FCER1AP12319 257 aa30.35■■■□□ 2.45
SMC4-206ENST00000465903 SLC4A3P48751 1232 aa30.35■■■□□ 2.45
SMC4-206ENST00000465903 TRMT44Q8IYL2 757 aaKnown RBP30.35■■■□□ 2.45
SMC4-206ENST00000465903 RASEFQ8IZ41 740 aa30.35■■■□□ 2.45
SMC4-206ENST00000465903 AGBL1Q96MI9 1066 aa30.35■■■□□ 2.45
SMC4-206ENST00000465903 RANBP17Q9H2T7 1088 aaKnown RBP30.35■■■□□ 2.45
SMC4-206ENST00000465903 MYH6P13533 1939 aa30.34■■■□□ 2.45
SMC4-206ENST00000465903 IGHA2P01877 340 aa30.34■■■□□ 2.45
SMC4-206ENST00000465903 CCDC174Q6PII3 467 aa30.34■■■□□ 2.45
SMC4-206ENST00000465903 DPP9Q86TI2 863 aa30.34■■■□□ 2.45
SMC4-206ENST00000465903 MMP19Q99542 508 aa30.34■■■□□ 2.45
SMC4-206ENST00000465903 BRCA2P51587 3418 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 ZKSCAN1P17029 563 aaPredicted RBP30.33■■■□□ 2.45
SMC4-206ENST00000465903 EN2P19622 333 aaPredicted RBP30.33■■■□□ 2.45
SMC4-206ENST00000465903 TSGA10IPQ3SY00 556 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 GPATCH4Q5T3I0 446 aaKnown RBP30.33■■■□□ 2.45
SMC4-206ENST00000465903 MAP3K21Q5TCX8 1036 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 RNF20Q5VTR2 975 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.33■■■□□ 2.45
SMC4-206ENST00000465903 RNF208Q9H0X6 261 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 CPVLQ9H3G5 476 aa30.33■■■□□ 2.45
SMC4-206ENST00000465903 WTAPQ15007 396 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms