RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 FANCD2OSQ96PS1 177 aa6.18□□□□□ -1.42
CDK13-203ENST00000465643 A2ML1A8K2U0 1454 aa6.18□□□□□ -1.42
CDK13-203ENST00000465643 PIK3C2BO00750 1634 aa6.18□□□□□ -1.42
CDK13-203ENST00000465643 TBX1O43435 398 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 VIL1P09327 827 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 MYCLP1P12525 358 aaPredicted RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 CDKN1CP49918 316 aaPredicted RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 PABPC4Q13310 644 aaKnown RBP eCLIP6.17□□□□□ -1.421e-6■■■□□ 19.1
CDK13-203ENST00000465643 TTLL4Q14679 1199 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 AXDND1Q5T1B0 1012 aaPredicted RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 NOL8Q76FK4 1167 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 THEMISQ8N1K5 641 aaPredicted RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 CEP170BQ9Y4F5 1589 aaPredicted RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 RGS13O14921 159 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 CBFA2T2O43439 604 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 HSPA2P54652 639 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 TM4SF20Q53R12 229 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 EXOSC6Q5RKV6 272 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 THNSL2Q86YJ6 484 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 NIM1KQ8IY84 436 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 PPP1R14AQ96A00 147 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 IRF2BPLQ9H1B7 796 aa6.17□□□□□ -1.42
CDK13-203ENST00000465643 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 SETD1BQ9UPS6 1966 aaKnown RBP6.17□□□□□ -1.42
CDK13-203ENST00000465643 FANCGO15287 622 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 VSIG8P0DPA2 414 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 AMPD1P23109 780 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 CNGA1P29973 690 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 YARSP54577 528 aaKnown RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 DUOXA2Q1HG44 320 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 MRPL41Q8IXM3 137 aaKnown RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 NINJ1Q92982 152 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 KISS1RQ969F8 398 aaPredicted RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 HAUS7Q99871 368 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 ADGRB3O60242 1522 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 KIF1BO60333 1816 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 A0A087X0B3 334 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 GBP1P32455 592 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 SLBPQ14493 270 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDK13-203ENST00000465643 PRAMEF13Q5VWM6 474 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 HID1Q8IV36 788 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 PRPF38AQ8NAV1 312 aaKnown RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 TMPRSS13Q9BYE2 586 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 METTL14Q9HCE5 456 aaKnown RBP6.16□□□□□ -1.42
CDK13-203ENST00000465643 PLAAQ9Y263 795 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 EID1Q9Y6B2 187 aa6.16□□□□□ -1.42
CDK13-203ENST00000465643 OIP5O43482 229 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 ITGAVP06756 1048 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 PDGFRBP09619 1106 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 PPP2R2AP63151 447 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 RNF214Q8ND24 703 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 MFSD3Q96ES6 412 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 SLC26A8Q96RN1 970 aa6.15□□□□□ -1.42
CDK13-203ENST00000465643 NCOA5Q9HCD5 579 aaKnown RBP6.15□□□□□ -1.42
CDK13-203ENST00000465643 MRPS23Q9Y3D9 190 aaKnown RBP6.15□□□□□ -1.42
CDK13-203ENST00000465643 ZNF142P52746 1687 aaPredicted RBP6.15□□□□□ -1.42
CDK13-203ENST00000465643 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 TONSLQ96HA7 1378 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 CLSPNQ9HAW4 1339 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.43
CDK13-203ENST00000465643 SLC6A19Q695T7 634 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 KRT26Q7Z3Y9 468 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 ZNF513Q8N8E2 541 aaPredicted RBP6.15□□□□□ -1.43
CDK13-203ENST00000465643 LRRN4CLQ8ND94 238 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 ISL2Q96A47 359 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 CDC6Q99741 560 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 IER2Q9BTL4 223 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 RUSC1Q9BVN2 902 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 EPN3Q9H201 632 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 PRDM6Q9NQX0 595 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 UBR1Q8IWV7 1749 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 TMEM131LA2VDJ0 1609 aa6.15□□□□□ -1.43
CDK13-203ENST00000465643 RIMS2Q9UQ26 1411 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 ADH5P11766 374 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 HOXB4P17483 251 aaPredicted RBP6.14□□□□□ -1.43
CDK13-203ENST00000465643 TRAPPC3LQ5T215 181 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 ANKLE2Q86XL3 938 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 SYNPOQ8N3V7 929 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDK13-203ENST00000465643 ZNF507Q8TCN5 953 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 DCAF11Q8TEB1 546 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 CCDC74BQ96LY2 380 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 DHRS4Q9BTZ2 278 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 LRP2BPQ9P2M1 347 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 TMEM2Q9UHN6 1383 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 ANKRD34BA5PLL1 514 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 PDE8AO60658 829 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 RNGTTO60942 597 aaKnown RBP6.14□□□□□ -1.43
CDK13-203ENST00000465643 CLEC3AO75596 197 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 SDSP20132 328 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 STAT3P40763 770 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 CCNFP41002 786 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 LONRF2Q1L5Z9 754 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 TAF7LQ5H9L4 462 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms