RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
VPS8-217ENST00000465213 ATE1O95260 518 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 GALK1P51570 392 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 RACK1P63244 317 aaKnown RBP6.78□□□□□ -1.32
VPS8-217ENST00000465213 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
VPS8-217ENST00000465213 KIAA0825Q8IV33 1275 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 PHACTR4Q8IZ21 702 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 EHMT1Q9H9B1 1298 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
VPS8-217ENST00000465213 SHROOM4Q9ULL8 1493 aa6.78□□□□□ -1.32
VPS8-217ENST00000465213 SLC22A31A6NKX4 558 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 RNF4P78317 190 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 CLCQ05315 142 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 ADGRF1Q5T601 910 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 REXO1Q8N1G1 1221 aaKnown RBP6.77□□□□□ -1.33
VPS8-217ENST00000465213 ZNF655Q8N720 491 aaPredicted RBP6.77□□□□□ -1.33
VPS8-217ENST00000465213 DACT3Q96B18 629 aaPredicted RBP6.77□□□□□ -1.33
VPS8-217ENST00000465213 KIF2CQ99661 725 aa6.77□□□□□ -1.33
VPS8-217ENST00000465213 ASCC2Q9H1I8 757 aaPredicted RBP6.77□□□□□ -1.33
VPS8-217ENST00000465213 TMEM82A0PJX8 343 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
VPS8-217ENST00000465213 PI3P19957 117 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 RPL10P27635 214 aaKnown RBP6.76□□□□□ -1.33
VPS8-217ENST00000465213 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
VPS8-217ENST00000465213 SRSF3P84103 164 aaKnown RBP6.76□□□□□ -1.33
VPS8-217ENST00000465213 NFIXQ14938 502 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 LINC00116Q8NCU8 138 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 NKD1Q969G9 470 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
VPS8-217ENST00000465213 N4BP3O15049 544 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 UBOX5O94941 541 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 PNLIPP16233 465 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 GBP1P32455 592 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 MCM4P33991 863 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
VPS8-217ENST00000465213 ARSHQ5FYA8 562 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 WAPLQ7Z5K2 1190 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 CXorf38Q8TB03 319 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 TCTN2Q96GX1 697 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 FOXP3Q9BZS1 431 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 XYLT2Q9H1B5 865 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 CNTD2Q9H8S5 307 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 GMIPQ9P107 970 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 TCFL5Q9UL49 500 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 JAG2Q9Y219 1238 aa6.75□□□□□ -1.33
VPS8-217ENST00000465213 LOC105371045A0A1W2PR82 267 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
VPS8-217ENST00000465213 SYN1P17600 705 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 ZNF165P49910 485 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 PCBP3P57721 371 aaKnown RBP6.74□□□□□ -1.33
VPS8-217ENST00000465213 ERVFRD-1P60508 538 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 MLECQ14165 292 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 NBPF9Q3BBW0 867 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 BBS9Q3SYG4 887 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 OVOS1Q6IE37 1185 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 CEP128Q6ZU80 1094 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 SIRT2Q8IXJ6 389 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS8-217ENST00000465213 EPB41L4AQ9HCS5 686 aaPredicted RBP6.74□□□□□ -1.33
VPS8-217ENST00000465213 SIRT5Q9NXA8 310 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 ZMYM5Q9UJ78 669 aa6.74□□□□□ -1.33
VPS8-217ENST00000465213 ABLIM1O14639 778 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 VIPR1P32241 457 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 EPHB3P54753 998 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 NBPF12Q5TAG4 269 aaPredicted RBP6.73□□□□□ -1.33
VPS8-217ENST00000465213 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 TMC3Q7Z5M5 1100 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 PANK1Q8TE04 598 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 ATG4CQ96DT6 458 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 ANTXR1Q9H6X2 564 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
VPS8-217ENST00000465213 SASH1O94885 1247 aa6.72□□□□□ -1.33
VPS8-217ENST00000465213 AFF3P51826 1226 aaKnown RBP6.72□□□□□ -1.33
VPS8-217ENST00000465213 CHMP4BP1P59074 171 aa6.72□□□□□ -1.33
VPS8-217ENST00000465213 NT5DC4Q86YG4 428 aa6.72□□□□□ -1.33
VPS8-217ENST00000465213 ZNF654Q8IZM8 581 aa6.72□□□□□ -1.33
VPS8-217ENST00000465213 MEIS3P2A8K0S8 358 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 RAG1P15918 1043 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
VPS8-217ENST00000465213 RAD51AP2Q09MP3 1159 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 FCRL2Q96LA5 508 aaPredicted RBP6.71□□□□□ -1.34
VPS8-217ENST00000465213 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 TNFRSF10DQ9UBN6 386 aa6.71□□□□□ -1.34
VPS8-217ENST00000465213 SSU72P8A0A1W2PR75 194 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 SIGLEC6O43699 453 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 SYPP08247 313 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 ENDOUP21128 410 aaKnown RBP6.7□□□□□ -1.34
VPS8-217ENST00000465213 CDR1P51861 262 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 RTP1P59025 263 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 PAK2Q13177 524 aa6.7□□□□□ -1.34
VPS8-217ENST00000465213 SNW1Q13573 536 aaKnown RBP6.7□□□□□ -1.34
VPS8-217ENST00000465213 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms