RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 PDE4DIPQ5VU43 2346 aa14.4□□□□□ -0.11
XRN1-204ENST00000465074 FARP2O94887 1054 aaPredicted RBP14.39□□□□□ -0.11
XRN1-204ENST00000465074 PGK2P07205 417 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 CYP2C19P33261 490 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 SNAP25P60880 206 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 KCTD2Q14681 263 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 RASGRP2Q7LDG7 609 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 RIOX2Q8IUF8 465 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
XRN1-204ENST00000465074 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
XRN1-204ENST00000465074 PAK6Q9NQU5 681 aaPredicted RBP14.39□□□□□ -0.11
XRN1-204ENST00000465074 ADAMTS5Q9UNA0 930 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
XRN1-204ENST00000465074 COBLO75128 1261 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 IMMTQ16891 758 aaKnown RBP14.38□□□□□ -0.11
XRN1-204ENST00000465074 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 CHURC1Q8WUH1 139 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 GPCPD1Q9NPB8 672 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
XRN1-204ENST00000465074 LAMA4Q16363 1823 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 NEDD4P46934 1319 aa14.38□□□□□ -0.11
XRN1-204ENST00000465074 B4E1Z4 1266 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
XRN1-204ENST00000465074 FGRP09769 529 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
XRN1-204ENST00000465074 CHMLP26374 656 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 STAT2P52630 851 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 CCDC174Q6PII3 467 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 ESR2Q92731 530 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 DDX11Q96FC9 970 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 GMCL1Q96IK5 515 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 PAWRQ96IZ0 340 aaKnown RBP14.37□□□□□ -0.11
XRN1-204ENST00000465074 TMEM47Q9BQJ4 181 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 IL25Q9H293 177 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
XRN1-204ENST00000465074 FRMPD2Q68DX3 1309 aaPredicted RBP14.37□□□□□ -0.11
XRN1-204ENST00000465074 MKI67P46013 3256 aaKnown RBP14.36□□□□□ -0.11
XRN1-204ENST00000465074 PLXNA1Q9UIW2 1896 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 KDM4AO75164 1064 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 HOXC6P09630 235 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 SLC16A2P36021 539 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 MAP3K21Q5TCX8 1036 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 PRPF38BQ5VTL8 546 aaKnown RBP14.36□□□□□ -0.11
XRN1-204ENST00000465074 FAM160B2Q86V87 743 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
XRN1-204ENST00000465074 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
XRN1-204ENST00000465074 PCP11498 1178 aaKnown RBP14.35□□□□□ -0.11
XRN1-204ENST00000465074 COPB2P35606 906 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 PTH1RQ03431 593 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 TTBK2Q6IQ55 1244 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 CENPQQ7L2Z9 268 aaPredicted RBP14.35□□□□□ -0.11
XRN1-204ENST00000465074 ABRAQ8N0Z2 381 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 HTATIP2Q9BUP3 242 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 SLC38A10Q9HBR0 1119 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
XRN1-204ENST00000465074 NEFLP07196 543 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 ALAS1P13196 640 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 DCAF4Q8WV16 495 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 MAML3Q96JK9 1138 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 TCP11L1Q9NUJ3 509 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 PRR12Q9ULL5 1215 aa14.34□□□□□ -0.11
XRN1-204ENST00000465074 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 TTC14Q96N46 770 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 KRT23Q9C075 422 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 RAD50Q92878 1312 aa14.33□□□□□ -0.12
XRN1-204ENST00000465074 H0YGN5 161 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 FDX1P10109 184 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
XRN1-204ENST00000465074 TRDNQ13061 729 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 SYDE2Q5VT97 1194 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 LHX8Q68G74 356 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 ZSCAN10Q96SZ4 725 aaPredicted RBP14.32□□□□□ -0.12
XRN1-204ENST00000465074 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 RNF146Q9NTX7 359 aa14.32□□□□□ -0.12
XRN1-204ENST00000465074 DDX20Q9UHI6 824 aaKnown RBP14.32□□□□□ -0.12
XRN1-204ENST00000465074 OGDHLQ9ULD0 1010 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms