RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 CCDC174Q6PII3 467 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
APTX-213ENST00000465003 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 TROAPQ12815 778 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 RUFY3Q7L099 469 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 DCAF4Q8WV16 495 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
APTX-213ENST00000465003 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 PSMC4P43686 418 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
APTX-213ENST00000465003 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 BACH2Q9BYV9 841 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 HOXC10Q9NYD6 342 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 FEM1BQ9UK73 627 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 MGAMO43451 1857 aa13.88□□□□□ -0.19
APTX-213ENST00000465003 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 PSMA5P28066 241 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 GCLCP48506 637 aaPredicted RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 TOB2Q14106 344 aaPredicted RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 PRPF38AQ8NAV1 312 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 GPRC5AQ8NFJ5 357 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 REPS2Q8NFH8 660 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 KIF2CQ99661 725 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
APTX-213ENST00000465003 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
APTX-213ENST00000465003 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 LIFRP42702 1097 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 NT5C2P49902 561 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
APTX-213ENST00000465003 NCAPG2Q86XI2 1143 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
APTX-213ENST00000465003 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 ERCC3P19447 782 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 STK3Q13188 491 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 GRM4Q14833 912 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 HOMER1Q86YM7 354 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 MORF4L1Q9UBU8 362 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 GABRQQ9UN88 632 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
APTX-213ENST00000465003 ZNF536O15090 1300 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
APTX-213ENST00000465003 CYTH3O43739 400 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 NEK4P51957 841 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 PRKCZQ05513 592 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 USH1GQ495M9 461 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 OTOP1Q7RTM1 612 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 CCAR1Q8IX12 1150 aaKnown RBP13.85□□□□□ -0.19
APTX-213ENST00000465003 CHURC1Q8WUH1 139 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
APTX-213ENST00000465003 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 MYH6P13533 1939 aa13.85□□□□□ -0.19
APTX-213ENST00000465003 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
APTX-213ENST00000465003 CDC27P30260 824 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 AK2P54819 239 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 ANAPC15P60006 121 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
APTX-213ENST00000465003 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
APTX-213ENST00000465003 FAM160B2Q86V87 743 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 CTCFLQ8NI51 663 aaPredicted RBP13.84□□□□□ -0.19
APTX-213ENST00000465003 ERO1AQ96HE7 468 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 TM6SF1Q9BZW5 370 aa13.84□□□□□ -0.19
APTX-213ENST00000465003 PLXNB2O15031 1838 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms