RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
SREBF2-205ENST00000463741 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 COG6Q9Y2V7 657 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 DCDC2CA8MYV0 355 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 MS4A1P11836 297 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 FAAP100Q0VG06 881 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 NUP133Q8WUM0 1156 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 DDX11Q96FC9 970 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
SREBF2-205ENST00000463741 FAM184BQ9ULE4 1060 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
SREBF2-205ENST00000463741 SYNGAP1Q96PV0 1343 aa18.08■□□□□ 0.49
SREBF2-205ENST00000463741 MOXD2PA6NHM9 499 aa18.08■□□□□ 0.48
SREBF2-205ENST00000463741 DNAJB2P25686 324 aa18.08■□□□□ 0.48
SREBF2-205ENST00000463741 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
SREBF2-205ENST00000463741 ANKRD33Q7Z3H0 272 aa18.08■□□□□ 0.48
SREBF2-205ENST00000463741 MSL3Q8N5Y2 521 aaKnown RBP18.08■□□□□ 0.48
SREBF2-205ENST00000463741 TSEN34Q9BSV6 310 aaKnown RBP18.08■□□□□ 0.48
SREBF2-205ENST00000463741 RIPK3Q9Y572 518 aa18.08■□□□□ 0.48
SREBF2-205ENST00000463741 MYADML2A6NDP7 307 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 NDUFB10O96000 172 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 RASA1P20936 1047 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 GRIN2CQ14957 1233 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 KCNA10Q16322 511 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 CPXCR1Q8N123 301 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 ZBTB40Q9NUA8 1239 aa18.07■□□□□ 0.48
SREBF2-205ENST00000463741 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
SREBF2-205ENST00000463741 F5H6K3 240 aa18.06■□□□□ 0.48
SREBF2-205ENST00000463741 SNAI1O95863 264 aaPredicted RBP18.06■□□□□ 0.48
SREBF2-205ENST00000463741 C6orf222P0C671 652 aaPredicted RBP18.06■□□□□ 0.48
SREBF2-205ENST00000463741 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
SREBF2-205ENST00000463741 KLRC3Q07444 240 aa18.06■□□□□ 0.48
SREBF2-205ENST00000463741 KLHDC9Q8NEP7 349 aa18.06■□□□□ 0.48
SREBF2-205ENST00000463741 GLT1D1Q96MS3 346 aa18.06■□□□□ 0.48
SREBF2-205ENST00000463741 MKNK2Q9HBH9 465 aa18.06■□□□□ 0.48
SREBF2-205ENST00000463741 DNAJC25-GNG10A0A024R161 153 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.05■□□□□ 0.48
SREBF2-205ENST00000463741 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.05■□□□□ 0.48
SREBF2-205ENST00000463741 MINDY4BA8MYZ0 360 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 MAMDC4Q6UXC1 1216 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 PRPF38AQ8NAV1 312 aaKnown RBP18.05■□□□□ 0.48
SREBF2-205ENST00000463741 KIFC2Q96AC6 838 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.482e-14■■■□□ 16.5
SREBF2-205ENST00000463741 RAVER2Q9HCJ3 691 aaKnown RBP18.05■□□□□ 0.48
SREBF2-205ENST00000463741 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.05■□□□□ 0.48
SREBF2-205ENST00000463741 NYAP2Q9P242 653 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 MYH4Q9Y623 1939 aa18.05■□□□□ 0.48
SREBF2-205ENST00000463741 MROH7Q68CQ1 1323 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 ADCY6O43306 1168 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
SREBF2-205ENST00000463741 ZBED4O75132 1171 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 DUSP11O75319 330 aaKnown RBP18.04■□□□□ 0.48
SREBF2-205ENST00000463741 TIMP1P01033 207 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 ACVR2BQ13705 512 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 SBK1Q52WX2 424 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 CCSAPQ6IQ19 270 aaPredicted RBP18.04■□□□□ 0.48
SREBF2-205ENST00000463741 ANKRD35Q8N283 1001 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 USP38Q8NB14 1042 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 VTI1AQ96AJ9 217 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 TIFAQ96CG3 184 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
SREBF2-205ENST00000463741 LRRCC1Q9C099 1032 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 ZNF576Q9H609 170 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 SPC25Q9HBM1 224 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 CLIP2Q9UDT6 1046 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 MCM3APO60318 1980 aa18.04■□□□□ 0.48
SREBF2-205ENST00000463741 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
SREBF2-205ENST00000463741 ATP2A1O14983 1001 aa18.03■□□□□ 0.48
SREBF2-205ENST00000463741 ASGR1P07306 291 aa18.03■□□□□ 0.48
SREBF2-205ENST00000463741 CST5P28325 142 aaPredicted RBP18.03■□□□□ 0.48
SREBF2-205ENST00000463741 MFSD5Q6N075 450 aa18.03■□□□□ 0.48
SREBF2-205ENST00000463741 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
SREBF2-205ENST00000463741 PCSK9Q8NBP7 692 aaKnown RBP18.03■□□□□ 0.48
SREBF2-205ENST00000463741 SYMPKQ92797 1274 aaKnown RBP18.03■□□□□ 0.48
SREBF2-205ENST00000463741 ELP1O95163 1332 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 PRDM1O75626 825 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 TDO2P48775 406 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■□□□□ 8.5
SREBF2-205ENST00000463741 CCDC144BQ3MJ40 725 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 CCDC174Q6PII3 467 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
SREBF2-205ENST00000463741 PPP1R12CQ9BZL4 782 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 ABHD16BQ9H3Z7 469 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 SLC38A10Q9HBR0 1119 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 HOMER2Q9NSB8 354 aa18.02■□□□□ 0.48
SREBF2-205ENST00000463741 ISY1Q9ULR0 285 aaKnown RBP18.02■□□□□ 0.48
SREBF2-205ENST00000463741 TTC28Q96AY4 2481 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
SREBF2-205ENST00000463741 CSF2RAP15509 400 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 GIMAP6Q6P9H5 292 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 CEP95Q96GE4 821 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 FGD4Q96M96 766 aa18.01■□□□□ 0.47
SREBF2-205ENST00000463741 CHMP4BQ9H444 224 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms