RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 ITGA4P13612 1032 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 ZNF445P59923 1031 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 SUMO1P63165 101 aaKnown RBP6.34□□□□□ -1.39
VRK2-208ENST00000463222 LRP8Q14114 963 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 FAM50AQ14320 339 aaKnown RBP6.34□□□□□ -1.39
VRK2-208ENST00000463222 MBTPS1Q14703 1052 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 NBPF9Q3BBW0 867 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 NOL9Q5SY16 702 aaKnown RBP6.34□□□□□ -1.39
VRK2-208ENST00000463222 DDX42Q86XP3 938 aaKnown RBP eCLIP6.34□□□□□ -1.39
VRK2-208ENST00000463222 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
VRK2-208ENST00000463222 AKTIPQ9H8T0 292 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 HOMER2Q9NSB8 354 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 USP21Q9UK80 565 aa6.34□□□□□ -1.39
VRK2-208ENST00000463222 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 KCNQ2O43526 872 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 GAS2O43903 313 aaKnown RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 DLX3O60479 287 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 VAMP4O75379 141 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 S100BP04271 92 aaPredicted RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 GLB1P16278 677 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 RNF4P78317 190 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 NRG1Q02297 640 aaPredicted RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 SNW1Q13573 536 aaKnown RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 LRRTM3Q86VH5 581 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 ARHGEF39Q8N4T4 335 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 SLC7A14Q8TBB6 771 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 SEMA6CQ9H3T2 930 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 NOL6Q9H6R4 1146 aaKnown RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 CGGBP1Q9UFW8 167 aaPredicted RBP6.33□□□□□ -1.4
VRK2-208ENST00000463222 NDOR1Q9UHB4 597 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
VRK2-208ENST00000463222 C6orf222P0C671 652 aaPredicted RBP6.32□□□□□ -1.4
VRK2-208ENST00000463222 SOX5P35711 763 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 KCNJ6P48051 423 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 GTF2IRD2BQ6EKJ0 949 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 STRA8Q7Z7C7 330 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 RNF180Q86T96 592 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 GTF2IRD2Q86UP8 949 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
VRK2-208ENST00000463222 LENG1Q96BZ8 264 aaPredicted RBP6.32□□□□□ -1.4
VRK2-208ENST00000463222 RCC1LQ96I51 464 aaKnown RBP6.32□□□□□ -1.4
VRK2-208ENST00000463222 UBL7Q96S82 380 aaPredicted RBP6.32□□□□□ -1.4
VRK2-208ENST00000463222 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 GFOD1Q9NXC2 390 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
VRK2-208ENST00000463222 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
VRK2-208ENST00000463222 RXRBP28702 533 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 ETV3P41162 512 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
VRK2-208ENST00000463222 POMZP3Q6PJE2 187 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 FGD2Q7Z6J4 655 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 ATL2Q8NHH9 583 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 RNF141Q8WVD5 230 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 DDX1Q92499 740 aaKnown RBP6.31□□□□□ -1.4
VRK2-208ENST00000463222 FBXL18Q96ME1 805 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 ZDHHC15Q96MV8 337 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 SLC52A2Q9HAB3 445 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 TRIM39Q9HCM9 518 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
VRK2-208ENST00000463222 SFMBT1Q9UHJ3 866 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 MINPP1Q9UNW1 487 aa6.31□□□□□ -1.4
VRK2-208ENST00000463222 A0A087WZG4 1122 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 MEIS1O00470 390 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 SNRPB2P08579 225 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 ECI1P42126 302 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
VRK2-208ENST00000463222 NTRK3Q16288 839 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 PRSS53Q2L4Q9 553 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 DPY19L1Q2PZI1 675 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 TMC3Q7Z5M5 1100 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 JDP2Q8WYK2 163 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 TYW1Q9NV66 732 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 TPX2Q9ULW0 747 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 MAPRE3Q9UPY8 281 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 DIS3Q9Y2L1 958 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 TNPO3Q9Y5L0 923 aaKnown RBP6.3□□□□□ -1.4
VRK2-208ENST00000463222 FHOD1Q9Y613 1164 aa6.3□□□□□ -1.4
VRK2-208ENST00000463222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 FAM83GA6ND36 823 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 LEFTY1O75610 366 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 NOS3P29474 1203 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 HOXC12P31275 282 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms