RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SMG8Q8ND04 991 aaKnown RBP7.63□□□□□ -1.19
COPS3-205ENST00000463097 BRF1Q92994 677 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 USP7Q93009 1102 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 ACDQ96AP0 544 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 BTBD6Q96KE9 485 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 KREMEN1Q96MU8 473 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 PIDD1Q9HB75 910 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 CYP4F12Q9HCS2 524 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 B4E1Z4 1266 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 EIF3JO75822 258 aaKnown RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 HOXC12P31275 282 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 ZNF445P59923 1031 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 SOX4Q06945 474 aaPredicted RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 COL9A3Q14050 684 aaPredicted RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 NOL9Q5SY16 702 aaKnown RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 C14orf80Q86SX3 495 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.62□□□□□ -1.19
COPS3-205ENST00000463097 GALNT6Q8NCL4 622 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 DNAJB8Q8NHS0 232 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 COL25A1Q9BXS0 654 aaPredicted RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 IFT22Q9H7X7 185 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 SUGCTQ9HAC7 445 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 DIS3Q9Y2L1 958 aaKnown RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 PCDHB12Q9Y5F1 795 aa7.62□□□□□ -1.19
COPS3-205ENST00000463097 COL17A1Q9UMD9 1497 aaPredicted RBP7.62□□□□□ -1.19
COPS3-205ENST00000463097 E2F8A0AVK6 867 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 DLL1O00548 723 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 BPIP17213 487 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 ATF3P18847 181 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 KCNJ6P48051 423 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 PIN1Q13526 163 aaPredicted RBP7.61□□□□□ -1.19
COPS3-205ENST00000463097 UBE4AQ14139 1066 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 PASD1Q8IV76 773 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 TMEM145Q8NBT3 493 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 OR2W6PQ8NHA6 318 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 PI4K2BQ8TCG2 481 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 SYTL5Q8TDW5 730 aaPredicted RBP7.61□□□□□ -1.19
COPS3-205ENST00000463097 HOOK2Q96ED9 719 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 RPS6KC1Q96S38 1066 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 YIPF4Q9BSR8 244 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 TRIM8Q9BZR9 551 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 RNF208Q9H0X6 261 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 CDH19Q9H159 772 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 NKX2-4Q9H2Z4 354 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 AASDHPPTQ9NRN7 309 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 FBXL21Q9UKT6 434 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 FHOD1Q9Y613 1164 aa7.61□□□□□ -1.19
COPS3-205ENST00000463097 NEMP1O14524 444 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 ZEB2O60315 1214 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 WISP1O95388 367 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 APBA3O96018 575 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 KRT18P05783 430 aaKnown RBP7.6□□□□□ -1.19
COPS3-205ENST00000463097 SNRPB2P08579 225 aaKnown RBP7.6□□□□□ -1.19
COPS3-205ENST00000463097 DRD2P14416 443 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 ASPAP45381 313 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 SCNN1BP51168 640 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 PPP2R5DQ14738 602 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 NBPF9Q3BBW0 867 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 KIAA1211Q6ZU35 1233 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 ZBTB46Q86UZ6 589 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 SMYD4Q8IYR2 804 aaPredicted RBP7.6□□□□□ -1.19
COPS3-205ENST00000463097 CHMP4CQ96CF2 233 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 SPOCK3Q9BQ16 436 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 NOL6Q9H6R4 1146 aaKnown RBP7.6□□□□□ -1.19
COPS3-205ENST00000463097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.6□□□□□ -1.19
COPS3-205ENST00000463097 NXF1Q9UBU9 619 aaKnown RBP7.6□□□□□ -1.19
COPS3-205ENST00000463097 PCOLCE2Q9UKZ9 415 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 SPEF1Q9Y4P9 236 aa7.6□□□□□ -1.19
COPS3-205ENST00000463097 PLIN1O60240 522 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 CRTAMO95727 393 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 CPP00450 1065 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 APPP05067 770 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 SCG5P05408 212 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 GRB10Q13322 594 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 HLTFQ14527 1009 aaKnown RBP eCLIP7.59□□□□□ -1.19
COPS3-205ENST00000463097 SLC35F1Q5T1Q4 408 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 TRAPPC3LQ5T215 181 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 ZCCHC8Q6NZY4 707 aaKnown RBP7.59□□□□□ -1.19
COPS3-205ENST00000463097 ACAD11Q709F0 780 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 FBXO11Q86XK2 927 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 ANKLE2Q86XL3 938 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 CNTD1Q8N815 330 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 C12orf50Q8NA57 414 aaPredicted RBP7.59□□□□□ -1.19
COPS3-205ENST00000463097 TTC8Q8TAM2 541 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 ZNF526Q8TF50 670 aaPredicted RBP7.59□□□□□ -1.19
COPS3-205ENST00000463097 C1orf159Q96HA4 380 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 WNK4Q96J92 1243 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 ORAI3Q9BRQ5 295 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 ASPNQ9BXN1 380 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 CYP26B1Q9NR63 512 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 TRHDEQ9UKU6 1024 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 TRAF6Q9Y4K3 522 aa7.59□□□□□ -1.19
COPS3-205ENST00000463097 KRBA1A5PL33 1030 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms