RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 STAT2P52630 851 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
RBM39-223ENST00000463004 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 CBX8Q9HC52 389 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 RAD17O75943 681 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 CCNA1P78396 465 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 INF2Q27J81 1249 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 CCDC51Q96ER9 411 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
RBM39-223ENST00000463004 STX10O60499 249 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 CKAP4Q07065 602 aaKnown RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 PTGDRQ13258 359 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 TUBB2AQ13885 445 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 TUBB2BQ9BVA1 445 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 RBSNQ9H1K0 784 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 RPS12P25398 132 aaKnown RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 UBXN1Q04323 297 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 USH1GQ495M9 461 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 TEKT3Q9BXF9 490 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 SALL1Q9NSC2 1324 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 MRC1P22897 1456 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
RBM39-223ENST00000463004 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 CPXCR1Q8N123 301 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
RBM39-223ENST00000463004 NEDD4P46934 1319 aa13.15□□□□□ -0.31
RBM39-223ENST00000463004 TRAF5O00463 557 aa13.15□□□□□ -0.31
RBM39-223ENST00000463004 KRT86O43790 486 aa13.15□□□□□ -0.31
RBM39-223ENST00000463004 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.31
RBM39-223ENST00000463004 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.31
RBM39-223ENST00000463004 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.31
RBM39-223ENST00000463004 AKR1B15C9JRZ8 316 aaPredicted RBP13.14□□□□□ -0.31
RBM39-223ENST00000463004 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
RBM39-223ENST00000463004 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 TUBBP07437 444 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 FANCCQ00597 558 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 SERPINA10Q9UK55 444 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 LTN1O94822 1766 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 FLOT1O75955 427 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 CLCN1P35523 988 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 ZNF75DP51815 510 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
RBM39-223ENST00000463004 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 KIF2CQ99661 725 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■□□□□ 8.8
RBM39-223ENST00000463004 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
RBM39-223ENST00000463004 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
RBM39-223ENST00000463004 CLRN2A0PK11 232 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
RBM39-223ENST00000463004 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 MMRN2Q9H8L6 949 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
RBM39-223ENST00000463004 GOLGA6L10A6NI86 522 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 LARGE1O95461 756 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 OSBPP22059 807 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 MIER3Q7Z3K6 550 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 ANKRD62A6NC57 917 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 SLC26A4O43511 780 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 TACC1O75410 805 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 LIG1P18858 919 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 NOLC1Q14978 699 aaKnown RBP eCLIP13.13□□□□□ -0.31
RBM39-223ENST00000463004 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.316e-7■■□□□ 12.1
RBM39-223ENST00000463004 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
RBM39-223ENST00000463004 SPZ1Q9BXG8 430 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 CTNND2Q9UQB3 1225 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 IKBKBO14920 756 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 PHACTR2O75167 634 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
RBM39-223ENST00000463004 COPB2P35606 906 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
RBM39-223ENST00000463004 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 COL4A3BPQ9Y5P4 624 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
RBM39-223ENST00000463004 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
RBM39-223ENST00000463004 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
RBM39-223ENST00000463004 ALAS1P13196 640 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms