RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 RAB3GAP1Q15042 981 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
SMC3-202ENST00000462899 VARS2Q5ST30 1063 aaKnown RBP9.44□□□□□ -0.9
SMC3-202ENST00000462899 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 MROH8Q9H579 483 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 GPR108Q9NPR9 543 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 XPNPEP3Q9NQH7 507 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 PIH1D3Q9NQM4 214 aaKnown RBP9.44□□□□□ -0.9
SMC3-202ENST00000462899 SNRKQ9NRH2 765 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 MYH7P12883 1935 aa9.44□□□□□ -0.9
SMC3-202ENST00000462899 COL4A4P53420 1690 aaPredicted RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 SYNRGQ9UMZ2 1314 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 GRXCR1A8MXD5 290 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 PGK1P00558 417 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 RARBP10826 455 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 BMP1P13497 986 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 TAL1P17542 331 aaPredicted RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 CDK7P50613 346 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 PLCD1P51178 756 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 SEPT2Q15019 361 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 MFSD5Q6N075 450 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 RNF180Q86T96 592 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 KLHDC9Q8NEP7 349 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 GAS2L1Q99501 681 aaPredicted RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 DBNDD2Q9BQY9 259 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 HOXC10Q9NYD6 342 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 NOB1Q9ULX3 412 aaKnown RBP9.43□□□□□ -0.9
SMC3-202ENST00000462899 ADAMTS5Q9UNA0 930 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 LCTP09848 1927 aa9.43□□□□□ -0.9
SMC3-202ENST00000462899 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 CST5P28325 142 aaPredicted RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 ZAP70P43403 619 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 TMEM132BQ14DG7 1078 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 GORABQ5T7V8 394 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 CERS3Q8IU89 383 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 SIAH1Q8IUQ4 282 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 RIOK1Q9BRS2 568 aaKnown RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 TINF2Q9BSI4 451 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 SLC5A4Q9NY91 659 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 DIS3Q9Y2L1 958 aaKnown RBP9.42□□□□□ -0.9
SMC3-202ENST00000462899 FPGT-TNNI3KV9GXZ4 949 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 MYH4Q9Y623 1939 aa9.42□□□□□ -0.9
SMC3-202ENST00000462899 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 ADCY6O43306 1168 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 GNAI3P08754 354 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
SMC3-202ENST00000462899 AKR1A1P14550 325 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 ACLYP53396 1101 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 PPIGQ13427 754 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMC3-202ENST00000462899 MIGA1Q8NAN2 632 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 REPS2Q8NFH8 660 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 VWCEQ96DN2 955 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 C1QTNF1Q9BXJ1 281 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 STARD7Q9NQZ5 370 aa9.41□□□□□ -0.9
SMC3-202ENST00000462899 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
SMC3-202ENST00000462899 ELP1O95163 1332 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 SLC25A27O95847 323 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 PGK2P07205 417 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 FCER1AP12319 257 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 CSF2RAP15509 400 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 CYP7A1P22680 504 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
SMC3-202ENST00000462899 TMED8Q6PL24 325 aaPredicted RBP9.4□□□□□ -0.9
SMC3-202ENST00000462899 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 RIOX2Q8IUF8 465 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 FAM126BQ8IXS8 530 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 HERVK_113Q902F9 699 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 C11orf16Q9NQ32 467 aa9.4□□□□□ -0.9
SMC3-202ENST00000462899 TLR7Q9NYK1 1049 aaKnown RBP9.4□□□□□ -0.9
SMC3-202ENST00000462899 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms