RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 ABRAQ8N0Z2 381 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 CPXCR1Q8N123 301 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 NPLOC4Q8TAT6 608 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 NEDD4P46934 1319 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 TOP1P11387 765 aaKnown RBP22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 SLC4A3P48751 1232 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 STAT2P52630 851 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 SNRNP48Q6IEG0 339 aaKnown RBP22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 RCSD1Q6JBY9 416 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 KCTD1Q719H9 257 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 FAM160B2Q86V87 743 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 MMP19Q99542 508 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 TEX13BQ9BXU2 312 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 FLRT1Q9NZU1 646 aa22.27■■□□□ 1.16
SLC6A1-204ENST00000462473 PARP14Q460N5 1801 aa22.27■■□□□ 1.15
SLC6A1-204ENST00000462473 KCTD2Q14681 263 aa22.26■■□□□ 1.15
SLC6A1-204ENST00000462473 TTC14Q96N46 770 aa22.26■■□□□ 1.15
SLC6A1-204ENST00000462473 TMEM47Q9BQJ4 181 aa22.26■■□□□ 1.15
SLC6A1-204ENST00000462473 SLC38A10Q9HBR0 1119 aa22.26■■□□□ 1.15
SLC6A1-204ENST00000462473 RAVER2Q9HCJ3 691 aaKnown RBP22.26■■□□□ 1.15
SLC6A1-204ENST00000462473 ATP2A1O14983 1001 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 COBLO75128 1261 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 FDX1P10109 184 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 NT5C2P49902 561 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 CCDC96Q2M329 555 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 CENPFP49454 3210 aa22.25■■□□□ 1.15
SLC6A1-204ENST00000462473 KDM4AO75164 1064 aa22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 FARP2O94887 1054 aaPredicted RBP22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 CCND3P30281 292 aaPredicted RBP22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 DCAF4Q8WV16 495 aa22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 ZKSCAN3Q9BRR0 538 aa22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 CRISPLD2Q9H0B8 497 aa22.24■■□□□ 1.15
SLC6A1-204ENST00000462473 B4E1Z4 1266 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 SGSM2O43147 1006 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 PLA2G6O60733 806 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 CYP2C19P33261 490 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 OAZ1P54368 228 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 CCDC178Q5BJE1 867 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 OLFML2BQ68BL8 750 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 RASGRP2Q7LDG7 609 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 IQCA1Q86XH1 822 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 KRT23Q9C075 422 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 RIPK3Q9Y572 518 aa22.23■■□□□ 1.15
SLC6A1-204ENST00000462473 COL11A1P12107 1806 aaPredicted RBP22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 NEFLP07196 543 aa22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 PGK2P07205 417 aa22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 PTH1RQ03431 593 aa22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 DGKHQ86XP1 1220 aa22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 CNNM2Q9H8M5 875 aa22.22■■□□□ 1.15
SLC6A1-204ENST00000462473 CNGA1P29973 690 aa22.21■■□□□ 1.15
SLC6A1-204ENST00000462473 SKAP1Q86WV1 359 aa22.21■■□□□ 1.15
SLC6A1-204ENST00000462473 DDX11Q96FC9 970 aa22.21■■□□□ 1.15
SLC6A1-204ENST00000462473 MAML3Q96JK9 1138 aa22.21■■□□□ 1.15
SLC6A1-204ENST00000462473 PRPF38BQ5VTL8 546 aaKnown RBP22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 UBE2Q1Q7Z7E8 422 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 ANKLE1Q8NAG6 615 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 CHST13Q8NET6 341 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 ZSCAN10Q96SZ4 725 aaPredicted RBP22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 ZSWIM5Q9P217 1185 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 FBXO40Q9UH90 709 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 PRR12Q9ULL5 1215 aa22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 U3KPZ7 1027 aaPredicted RBP22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 FRMPD2Q68DX3 1309 aaPredicted RBP22.2■■□□□ 1.14
SLC6A1-204ENST00000462473 IGHA2P01877 340 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 TRDNQ13061 729 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 ZNF792Q3KQV3 632 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 TTBK2Q6IQ55 1244 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 CCDC174Q6PII3 467 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 KIAA1211Q6ZU35 1233 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 HTATIP2Q9BUP3 242 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 OGDHLQ9ULD0 1010 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 DIS3Q9Y2L1 958 aaKnown RBP22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 ZNF236Q9UL36 1845 aa22.19■■□□□ 1.14
SLC6A1-204ENST00000462473 PDHBP11177 359 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 SLC16A2P36021 539 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 SNAP25P60880 206 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 ANKRD35Q8N283 1001 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 DPF3Q92784 378 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 PAWRQ96IZ0 340 aaKnown RBP22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 AGBL1Q96MI9 1066 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 UBAC1Q9BSL1 405 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 KAT14Q9H8E8 782 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 HOMER2Q9NSB8 354 aa22.18■■□□□ 1.14
SLC6A1-204ENST00000462473 LAMA4Q16363 1823 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 ZNF536O15090 1300 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 CYP21A2P08686 494 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 CYBAP13498 195 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 BMP2KLQ5H9B9 411 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 SYDE2Q5VT97 1194 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 LHX8Q68G74 356 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 BTNL9Q6UXG8 535 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 NECAB2Q7Z6G3 386 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 BRCA2P51587 3418 aa22.17■■□□□ 1.14
SLC6A1-204ENST00000462473 TNKSO95271 1327 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 PDE4DIPQ5VU43 2346 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 MSCO60682 206 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 ALAS1P13196 640 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms