RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CWC22Q9HCG8 908 aaKnown RBP18.63■□□□□ 0.57
ERCC3-206ENST00000462306 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 ZBED4O75132 1171 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 SLC25A27O95847 323 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 XRCC5P13010 732 aaKnown RBP18.62■□□□□ 0.57
ERCC3-206ENST00000462306 CYP2B6P20813 491 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 MAP2K5Q13163 448 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 GRB14Q14449 540 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 SEC23AQ15436 765 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 NCAPG2Q86XI2 1143 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 NCOA7Q8NI08 942 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 UBAC1Q9BSL1 405 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 ISY1Q9ULR0 285 aaKnown RBP18.62■□□□□ 0.57
ERCC3-206ENST00000462306 IVNS1ABPQ9Y6Y0 642 aa18.62■□□□□ 0.57
ERCC3-206ENST00000462306 STRNO43815 780 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 FDX1P10109 184 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 RGS2P41220 211 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 MTFR1Q15390 333 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 TTBK2Q6IQ55 1244 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
ERCC3-206ENST00000462306 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
ERCC3-206ENST00000462306 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 PRR12Q9ULL5 1215 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 CENPFP49454 3210 aa18.61■□□□□ 0.57
ERCC3-206ENST00000462306 FRMPD2Q68DX3 1309 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 MYCP01106 439 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 INHAP05111 366 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 HOXC6P09630 235 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 ANTXR2P58335 489 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 ZNF543Q08ER8 600 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 IKQ13123 557 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 SNRNP48Q6IEG0 339 aaKnown RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 TRIB2Q92519 343 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 APBA2Q99767 749 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 RAVER2Q9HCJ3 691 aaKnown RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-206ENST00000462306 RIPK3Q9Y572 518 aa18.6■□□□□ 0.57
ERCC3-206ENST00000462306 ZNF536O15090 1300 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 ZNF236Q9UL36 1845 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 HMGCRP04035 888 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 ADORA2AP29274 412 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 COPB2P35606 906 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 SLC16A2P36021 539 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 RGS19P49795 217 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 OAZ1P54368 228 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 UBXN2AP68543 259 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 COL9A3Q14050 684 aaPredicted RBP18.59■□□□□ 0.57
ERCC3-206ENST00000462306 CCL14Q16627 93 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 ABRAQ8N0Z2 381 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 CPXCR1Q8N123 301 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 GPCPD1Q9NPB8 672 aa18.59■□□□□ 0.57
ERCC3-206ENST00000462306 CTDP1Q9Y5B0 961 aaPredicted RBP18.59■□□□□ 0.57
ERCC3-206ENST00000462306 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
ERCC3-206ENST00000462306 TRIM32Q13049 653 aa18.58■□□□□ 0.56
ERCC3-206ENST00000462306 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
ERCC3-206ENST00000462306 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
ERCC3-206ENST00000462306 NPLOC4Q8TAT6 608 aa18.58■□□□□ 0.56
ERCC3-206ENST00000462306 COBLO75128 1261 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 FCER1AP12319 257 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 CCL5P13501 91 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 SNAP25P60880 206 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 GPATCH4Q5T3I0 446 aaKnown RBP18.57■□□□□ 0.56
ERCC3-206ENST00000462306 SYDE2Q5VT97 1194 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
ERCC3-206ENST00000462306 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 TMEM106CQ9BVX2 250 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 UNC93B1Q9H1C4 597 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
ERCC3-206ENST00000462306 RBBP6Q7Z6E9 1792 aaKnown RBP18.57■□□□□ 0.56
ERCC3-206ENST00000462306 KIAA0100Q14667 2235 aaKnown RBP18.57■□□□□ 0.56
ERCC3-206ENST00000462306 IGHA2P01877 340 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 GOLGA8HP0CJ92 632 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 ZKSCAN1P17029 563 aaPredicted RBP18.56■□□□□ 0.56
ERCC3-206ENST00000462306 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 MAP3K21Q5TCX8 1036 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.56■□□□□ 0.56
ERCC3-206ENST00000462306 DPP9Q86TI2 863 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 AGBL1Q96MI9 1066 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 MMP19Q99542 508 aa18.56■□□□□ 0.56
ERCC3-206ENST00000462306 RANBP17Q9H2T7 1088 aaKnown RBP18.56■□□□□ 0.56
ERCC3-206ENST00000462306 ERICH2A1L162 156 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 KCTD2Q14681 263 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 SART3Q15020 963 aaKnown RBP18.55■□□□□ 0.56
ERCC3-206ENST00000462306 CCDC174Q6PII3 467 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 CHST13Q8NET6 341 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 KCNB2Q92953 911 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 MTA3Q9BTC8 594 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
ERCC3-206ENST00000462306 PRC1O43663 620 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 GJB1P08034 283 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms